Roshan Sharma Poudel
YOU?
Author Swipe
View article: Natural expression variation for the Arabidopsis MED20a mediator complex subunit influences quantitative resistance to Sclerotinia sclerotiorum
Natural expression variation for the Arabidopsis MED20a mediator complex subunit influences quantitative resistance to Sclerotinia sclerotiorum Open
Introduction The necrotrophic fungus Sclerotinia sclerotiorum is a destructive plant pathogen that can infect a broad range of host plants, including many agriculturally important crop species. Resistance to S. sclerotiorum is partial and …
View article: Rpt5 encodes a receptor-like protein that provides broad and effective net form net blotch (Pyrenophora teres f. teres) resistance in barley
Rpt5 encodes a receptor-like protein that provides broad and effective net form net blotch (Pyrenophora teres f. teres) resistance in barley Open
The foliar disease net form net blotch (NFNB), caused by the necrotrophic fungal pathogen Pyrenophora teres f. teres (Ptt), causes significant yield and quality losses of barley worldwide. Dominant resistance conferred by the Resistance to…
View article: High resolution mapping of a novel non-transgressive hybrid susceptibility locus in barley exploited by P. teres f. maculata
High resolution mapping of a novel non-transgressive hybrid susceptibility locus in barley exploited by P. teres f. maculata Open
Hybrid genotypes can provide significant yield gains over conventional inbred varieties due to heterosis or hybrid vigor. However, hybrids can also display unintended negative attributes or phenotypes such as extreme pathogen susceptibilit…
View article: High resolution mapping of novel non-transgressive hybrid susceptibility in barley exploited by<i>P. teres</i>f.<i>maculata</i>maps to a single pentatricopeptide repeat-containing protein
High resolution mapping of novel non-transgressive hybrid susceptibility in barley exploited by<i>P. teres</i>f.<i>maculata</i>maps to a single pentatricopeptide repeat-containing protein Open
Hybrid genotypes can provide significant yield gains over conventional inbred varieties due to heterosis or hybrid vigor. However, hybrids can also display unintended negative attributes or phenotypes such as extreme pathogen susceptibilit…
View article: Population and genome-wide association studies of Sclerotinia sclerotiorum isolates collected from diverse host plants throughout the United States
Population and genome-wide association studies of Sclerotinia sclerotiorum isolates collected from diverse host plants throughout the United States Open
Introduction Sclerotinia sclerotiorum is a necrotrophic fungal pathogen causing disease and economic loss on numerous crop plants. This fungus has a broad host range and can infect over 400 plant species, including important oilseed crops …
View article: Additional file 1 of Association mapping reveals a reciprocal virulence/avirulence locus within diverse US Pyrenophora teres f. maculata isolates
Additional file 1 of Association mapping reveals a reciprocal virulence/avirulence locus within diverse US Pyrenophora teres f. maculata isolates Open
Additional file 1: Supplemental File 1. R2valuesfor all pairwise comparisons across the chromosomes within the genome.
View article: Additional file 2 of Association mapping reveals a reciprocal virulence/avirulence locus within diverse US Pyrenophora teres f. maculata isolates
Additional file 2 of Association mapping reveals a reciprocal virulence/avirulence locus within diverse US Pyrenophora teres f. maculata isolates Open
Additional file 2: Supplemental File 2. Translated candidategene listed used for entry into SignalP, EffectorP and BLASTP.
View article: Genetic mapping of host resistance to the <i>Pyrenophora teres</i> f. <i>maculata</i> isolate 13IM8.3
Genetic mapping of host resistance to the <i>Pyrenophora teres</i> f. <i>maculata</i> isolate 13IM8.3 Open
Spot form net blotch (SFNB), caused by the necrotrophic fungal pathogen Pyrenophora teres f. maculata (Ptm), is a foliar disease of barley that results in significant yield losses in major growing regions worldwide. Understanding the host-…
View article: Genome-wide association mapping of <i>Pyrenophora teres</i> f. <i>maculata</i> and <i>Pyrenophora teres</i> f. <i>teres</i> resistance loci utilizing natural Turkish wild and landrace barley populations
Genome-wide association mapping of <i>Pyrenophora teres</i> f. <i>maculata</i> and <i>Pyrenophora teres</i> f. <i>teres</i> resistance loci utilizing natural Turkish wild and landrace barley populations Open
Unimproved landraces and wild relatives of crops are sources of genetic diversity that were lost post domestication in modern breeding programs. To tap into this rich resource, genome-wide association studies in large plant genomes have en…
View article: Genome wide association mapping of<i>Pyrenophora teres</i>f.<i>maculata</i>and<i>Pyrenophora teres</i>f.<i>teres</i>resistance loci utilizing natural Turkish wild and landrace barley populations
Genome wide association mapping of<i>Pyrenophora teres</i>f.<i>maculata</i>and<i>Pyrenophora teres</i>f.<i>teres</i>resistance loci utilizing natural Turkish wild and landrace barley populations Open
Unimproved landraces and wild relatives of crops are sources of genetic diversity that were lost post domestication in modern breeding programs. To tap into this rich resource, genome wide association studies in large plant genomes have en…
View article: Expansion of Internal Hyphal Growth in Fusarium Head Blight–Infected Grains Contributes to the Elevated Mycotoxin Production During the Malting Process
Expansion of Internal Hyphal Growth in Fusarium Head Blight–Infected Grains Contributes to the Elevated Mycotoxin Production During the Malting Process Open
Fusarium head blight (FHB) and the occurrence of mycotoxins is the largest food safety threat to malting and brewing grains. Worldwide surveys of commercial beers have reported that the trichothecene mycotoxin deoxynivalenol (DON) is the m…
View article: The Barley HvWRKY6 Transcription Factor Is Required for Resistance Against Pyrenophora teres f. teres
The Barley HvWRKY6 Transcription Factor Is Required for Resistance Against Pyrenophora teres f. teres Open
Barley is an important cereal crop worldwide because of its use in the brewing and distilling industry. However, adequate supplies of quality malting barley are threatened by global climate change due to drought in some regions and excess …
View article: Supplementary Tables and Figs for QTL mapping of barley resistance to SFNB.docx
Supplementary Tables and Figs for QTL mapping of barley resistance to SFNB.docx Open
Tables S1 and S2 showed the average disease scores for the segregating populations. Tables S3 and S5 provided genotype scores used for generation of linkage maps. Tables S4 and S6 showed the summary of seven genetic linkage groups generate…
View article: Supplementary Tables and Figs for QTL mapping of barley resistance to SFNB.docx
Supplementary Tables and Figs for QTL mapping of barley resistance to SFNB.docx Open
Tables S1 and S2 showed the average disease scores for the segregating populations. Tables S3 and S5 provided genotype scores used for generation of linkage maps. Tables S4 and S6 showed the summary of seven genetic linkage groups generate…
View article: Supplementary Tables and Figs for QTL mapping of barley resistance to SFNB.docx
Supplementary Tables and Figs for QTL mapping of barley resistance to SFNB.docx Open
Tables S1 and S2 showed the average disease scores for the segregating populations. Tables S3 and S5 provided genotype scores used for generation of linkage maps. Tables S4 and S6 showed the summary of seven genetic linkage groups generate…
View article: Supplementary Tables and Figs for QTL mapping of barley resistance to SFNB.docx
Supplementary Tables and Figs for QTL mapping of barley resistance to SFNB.docx Open
Tables S1 and S2 showed the average disease scores for the segregating populations. Tables S3 and S5 provided genotype scores used for generation of linkage maps. Tables S4 and S6 showed the summary of seven genetic linkage groups generate…
View article: Supplementary Tables and Figs for QTL mapping of barley resistance to SFNB.docx
Supplementary Tables and Figs for QTL mapping of barley resistance to SFNB.docx Open
Tables S1 and S2 showed the average disease scores for the segregating populations. Tables S3 and S5 provided genotype scores used for generation of linkage maps. Tables S4 and S6 showed the summary of seven genetic linkage groups generate…
View article: Supplementary Tables and Figs for QTL mapping of barley resistance to SFNB.docx
Supplementary Tables and Figs for QTL mapping of barley resistance to SFNB.docx Open
Supplementary Tables and Figs for QTL mapping of barley resistance to SFNB
View article: Supplementary Tables and Figs for QTL mapping of barley resistance to SFNB.docx
Supplementary Tables and Figs for QTL mapping of barley resistance to SFNB.docx Open
Supplementary Tables and Figs for QTL mapping of barley resistance to SFNB
View article: Supplementary Tables and Figs for QTL mapping of barley resistance to SFNB.docx
Supplementary Tables and Figs for QTL mapping of barley resistance to SFNB.docx Open
Tables S1 and S2 showed the average disease scores for the segregating populations. Tables S3 and S5 provided genotype scores used for generation of linkage maps. Tables S4 and S6 showed the summary of seven genetic linkage groups generate…
View article: Supplementary Tables and Figs for QTL mapping of barley resistance to SFNB.docx
Supplementary Tables and Figs for QTL mapping of barley resistance to SFNB.docx Open
Tables S1 and S2 showed the average disease scores for the segregating populations. Tables S3 and S5 provided genotype scores used for generation of linkage maps. Tables S4 and S6 showed the summary of seven genetic linkage groups generate…
View article: Supplementary Tables and Figs for QTL mapping of barley resistance to SFNB.docx
Supplementary Tables and Figs for QTL mapping of barley resistance to SFNB.docx Open
Tables S1 and S2 showed the average disease scores for the segregating populations. Tables S3 and S5 provided genotype scores used for generation of linkage maps. Tables S4 and S6 showed the summary of seven genetic linkage groups generate…
View article: Supplementary Tables and Figs for QTL mapping of barley resistance to SFNB.docx
Supplementary Tables and Figs for QTL mapping of barley resistance to SFNB.docx Open
Tables S1 and S2 showed the average disease scores for the segregating populations. Tables S3 and S5 provided genotype scores used for generation of linkage maps. Tables S4 and S6 showed the summary of seven genetic linkage groups generate…
View article: RNAseq Analysis of Rhizomania-Infected Sugar Beet Provides the First Genome Sequence of Beet Necrotic Yellow Vein Virus from the USA and Identifies a Novel Alphanecrovirus and Putative Satellite Viruses
RNAseq Analysis of Rhizomania-Infected Sugar Beet Provides the First Genome Sequence of Beet Necrotic Yellow Vein Virus from the USA and Identifies a Novel Alphanecrovirus and Putative Satellite Viruses Open
“Rhizomania” of sugar beet is a soilborne disease complex comprised of beet necrotic yellow vein virus (BNYVV) and its plasmodiophorid vector, Polymyxa betae. Although BNYVV is considered the causal agent of rhizomania, additional viruses …
View article: Localization of hyphal growth associated with mycotoxin production during the malting of Fusarium head blight infected grains
Localization of hyphal growth associated with mycotoxin production during the malting of Fusarium head blight infected grains Open
Fusarium head blight (FHB) and the occurrence of mycotoxins is the largest food safety threat to malting and brewing grains. Objectives of the current study were to localize the growth of Fusarium within FHB infected kernels and to associa…
View article: Microscopic, Biochemical, and Molecular Comparisons of Moderately Resistant and Susceptible <i>Populus</i> Genotypes Inoculated with <i>Sphaerulina musiva</i>
Microscopic, Biochemical, and Molecular Comparisons of Moderately Resistant and Susceptible <i>Populus</i> Genotypes Inoculated with <i>Sphaerulina musiva</i> Open
Sphaerulina musiva, the causal agent of Septoria leaf spot and stem canker, is responsible for mortality and yield loss in Populus plantations. However, little is known about the mode of infection and the mechanisms of resistance in this p…
View article: MOESM2 of Transcriptome-wide association study identifies putative elicitors/suppressor of Puccinia graminis f. sp. tritici that modulate barley rpg4-mediated stem rust resistance
MOESM2 of Transcriptome-wide association study identifies putative elicitors/suppressor of Puccinia graminis f. sp. tritici that modulate barley rpg4-mediated stem rust resistance Open
Additional file 2. A FASTA file containing coding sequences of the updated gene models of Pgt using the transcript sequences generated from this study in addition to the publicly available gene models of reference genome of Pgt race SCCL.
View article: MOESM3 of Transcriptome-wide association study identifies putative elicitors/suppressor of Puccinia graminis f. sp. tritici that modulate barley rpg4-mediated stem rust resistance
MOESM3 of Transcriptome-wide association study identifies putative elicitors/suppressor of Puccinia graminis f. sp. tritici that modulate barley rpg4-mediated stem rust resistance Open
Additional file 3. A FASTA file containing amino acid sequences of the updated gene models of Pgt using the transcript sequences generated from this study in addition to the publicly available gene models of Pgt race SCCL.