Explanipedia

Population genomics of Vitis pseudoreticulata reveals the genetic basis of fungal resistance in grapevine Open

Zhen Zhang, Wénwén Liú, Tianhao Zhang, Zhuyifu Chen, Mengyan Zhang , et al. · 2025

Biosynthesis of Edible Terpenoids: Hosts and Applications Open

Mengyu Wang, Z. Zhang, Xinyu Liu, Zhixuan Liu, Ruirui Liu · 2025

Microbial foods include microbial biomass, naturally fermented foods, and heterologously synthesized food ingredients derived from microbial fermentation. Terpenoids, using isoprene as the basic structure, possess various skeletons and fun…

Developing an Agent-Based Mathematical Model for Simulating Post-Irradiation Cellular Response: A Crucial Component of a Digital Twin Framework for Personalized Radiation Treatment Open

Ruirui Liu, M. Swat, James A. Glazier, Lei Yu, S. Zhou , et al. · 2025

In this study, we present the Physical-Bio Translator, an agent-based simulation model designed to simulate cellular responses following irradiation. This simulation framework is based on a novel cell-state transition model that accurately…

Hexagon-Net: Heterogeneous Cross-View Aligned Graph Attention Networks for Implied Volatility Surface Prediction Open

Kaiwei Liang, Ruirui Liu, Huichou Huang, Johannes Ruf, Peilin Zhao , et al. · 2025

Context-Aware Frequency-Embedding Networks for Spatio-Temporal Portfolio Selection Open

Ruirui Liu, Huichou Huang, Johannes Ruf, H. H. Liu, Qiang Wu · 2025

Context-Aware Frequency-Embedding Networks for Spatio-Temporal Portfolio Selection Open

Ruirui Liu, Huichou Huang, Johannes Ruf, H. H. Liu, Qiang Wu · 2025

Recent developments in the applications of deep reinforcement learning methods to portfolio selection have achieved superior performance to conventional methods. However, two major challenges remain unaddressed in these models and inevitab…

Ionospheric VTEC Maps Forecasting Based on Graph Neural Network With Transformers Open

Ruirui Liu, Yiping Jiang · 2024

The precise and timely forecasting of vertical total electron content (VTEC) in the ionosphere is crucial for navigation, communication systems, and space weather monitoring. Recent research has applied deep learning to predict VTEC maps, …

SIMULTANEOUS INTENSITY ENERGY MODULATION AND COMPENSATION (SIEMAC) OPTIMIZATION FRAMEWORK FOR PROTON FLASH TREATMENT PLANNING Open

N. Harrison, Minglei Kang, Ruirui Liu, Serdar Charyyev, Niklas Wahl , et al. · 2024

A NOVEL OPTIMIZATION FRAMEWORK FOR PROTON FLASH TREATMENT PLANNING ALLOWS DOSE, DOSE RATE, AND LET OPTIMIZATION USING PATIENT-SPECIFIC RIDGE FILTERS Open

Ruirui Liu, Serdar Charyyev, Niklas Wahl, Wei Liu, Minglei Kang , et al. · 2024

Phylogenomic analyses and comparative genomic studies of Thermus strains isolated from Tengchong and Tibet hot springs, China Open

Inam Ullah Khan, Muhammad Saqib, Arshia Amin, Sadia Manzoor, Iftikhar Ahmed , et al. · 2024

Genus Thermus is the main focus of researcher among the thermophiles. Members of this genus are the inhabitants of both natural and artificial thermal environments. We performed phylogenomic analyses and comparative genomic studies to unra…

Array-based specific classification of bacterial species via the redox state transition of riboflavin Open

Xizhe Li, Pengxin Xue, Bingyu Li, Ruirui Liu, Tao Fu , et al. · 2024

We observed redox state transitions of riboflavin (Rf) upon incubation with gram-positive (G+) or gram-negative (G-) bacteria. The consequent transitions based on the proton-coupled electron transfer (PCET) reaction alters the reducibility…

Calculation Method of Biological Dose for Boron Neutron Capture Therapy Based on Microdosimetry Open

Wentao Peng, Ruirui Liu, Zhifeng Li, Bo Rong, Sheng Wang , et al. · 2024

Contents list Open

Jiaxin Ma, Shuanghao Zheng, Yinghua Fu, Xiao Wang, Jieqiong Qin , et al. · 2024

Multimodal multiscale dynamic graph convolution networks for stock price prediction Open

Ruirui Liu, H. H. Liu, Huichou Huang, Bo Song, Qingyao Wu · 2023

Typhoon Intensity Prediction with Vision Transformer Open

Huanxin Chen, Pengshuai Yin, Huichou Huang, Qiang Wu, Ruirui Liu , et al. · 2023

Predicting typhoon intensity accurately across space and time is crucial for issuing timely disaster warnings and facilitating emergency response. This has vast potential for minimizing life losses and property damages as well as reducing …

Adaptive-Labeling for Enhancing Remote Sensing Cloud Understanding Open

Jay Gala, Sauradip Nag, Huichou Huang, Ruirui Liu, Xiatian Zhu · 2023

Cloud analysis is a critical component of weather and climate science, impacting various sectors like disaster management. However, achieving fine-grained cloud analysis, such as cloud segmentation, in remote sensing remains challenging du…

Spatial transcriptomics reveals heterogeneity of macrophages in the tumor microenvironment of granulomatous slack skin Open

Yawei Feng, Shiguan Wang, Jianjun Xie, Bin Ding, Min Wang , et al. · 2023

Granulomatous slack skin (GSS) is an extremely rare subtype of cutaneous T‐cell lymphoma accompanied by an abundant number of macrophages and is clinically characterized by the development of pendulous skin folds. However, the characterist…

Measurement of the time structure of FLASH beams using prompt gamma rays and secondary neutrons as surrogates Open

Serdar Charyyev, Ruirui Liu, Xiaofeng Yang, Jun Zhou, Anees Dhabaan , et al. · 2023

Objective . The aim of this study was to investigate the feasibility of online monitoring of irradiation time (IRT) and scan time for FLASH proton radiotherapy using a pixelated semiconductor detector. Approach . Measurements of the time s…

A Review of Macroscopic Carbon Emission Prediction Model Based on Machine Learning Open

Yuhong Zhao, Ruirui Liu, Zhansheng Liu, Liang Liu, Jingjing Wang , et al. · 2023

Under the background of global warming and the energy crisis, the Chinese government has set the goal of carbon peaking and carbon neutralization. With the rapid development of machine learning, some advanced machine learning algorithms ha…

Feasibility study of hybrid inverse planning with transmission beams and single‐energy spread‐out Bragg peaks for proton FLASH radiotherapy Open

Chaoqiong Ma, Xiaofeng Yang, Chih‐Wei Chang, Ruirui Liu, Duncan Bohannon , et al. · 2023

Background Ultra‐high dose rate (FLASH) proton planning with only transmission beams (TBs) has limitations in normal tissue sparing. The single‐energy spread‐out Bragg peaks (SESOBPs) of the FLASH dose rate have been demonstrated feasible …

Engineering of a probiotic yeast for the production and secretion of medium-chain fatty acids antagonistic to an opportunistic pathogen Candida albicans Open

Hua Ling, Ruirui Liu, Qi Hui Sam, Haosheng Shen, Louis Yi Ann Chai , et al. · 2023

Candida albicans is an opportunistic pathogen, with its infection as one of the causes of morbidity or mortality. Notably, the probiotic yeast Saccharomyces cerevisiae var. boulardii has shown the potential to fight against Candida infecti…

A novel inverse algorithm to solve IPO-IMPT of proton FLASH therapy with sparse filters Open

N. Harrison, Minglei Kang, Ruirui Liu, Serdar Charyyev, Niklas Wahl , et al. · 2023

Purpose:The recently proposed IPO-IMPT framework allows simultaneous optimization of dose, dose rate, and LET for FLASH treatment planning. Finding solutions to IPO-IMPT is difficult due to computational intensiveness. Nevertheless, an inv…

The hydration of Li+ and Mg2+ in subnano carbon nanotubes using a multiscale theoretical approach Open

Ruirui Liu, Zhuanfang Jing, Yifan Shao, Yongquan Zhou, Fayan Zhu , et al. · 2023

The separation of brines with high Mg/Li mass ratios is a huge challenge. To provide a theoretical basis for the design of separation materials, the hydration of Li + and Mg 2+ in confinement using carbon nanotubes (CNTs) as the 1-D nanopo…

Synthetic Bacterial Community Reshape Microbial Communities and Enhance Nutrient Supply in Desertified Lands of Northwest China Open

Xinwei Hao, Xiao Wang, Chunlei Chen, Ruirui Liu, Yanling Yin , et al. · 2023

A novel strategy combining Mini-CEX and OSCE to assess standardized training of professional postgraduates in department of prosthodontics Open

Lin Niu, Yukun Mei, Xiaoqiao Xu, Yi Guo, Zhen Li , et al. · 2022

Development of a Full Monte Carlo Therapeutic Dose Calculation Toolkit for Halcyon Using Geant4 Open

Ruirui Liu, Zhen Ji, Xiandong Zhao, Tianyu Zhao, Abhishek Sethi , et al. · 2022

Purpose: To develop a Monte Carlo (MC) therapeutic dose calculation toolkit of a recently released ring gantry linac in Geant4 (Version 10.7) for secondary dose validation of radiotherapy plan. Methods: For the Halcyon (Varian Medical Syst…

A potential revolution in cancer treatment: A topical review of FLASH radiotherapy Open

Yuan Gao, Ruirui Liu, Chih‐Wei Chang, Serdar Charyyev, Jun Zhou , et al. · 2022

FLASH radiotherapy (RT) is a novel technique in which the ultrahigh dose rate (UHDR) (≥40 Gy/s) is delivered to the entire treatment volume. Recent outcomes of in vivo studies show that the UHDR RT has the potential to spare normal tissue …

Author Index Open

Allegra Allgeier, Amjad Sohail, Anwar Khadija, Απόστολος Αξενόπουλος, Zubair Arif , et al. · 2022

Feasibility Study of Hybrid Inverse Planning with Transmission Beams and Single-energy Spread-out Bragg Peaks for Proton Flash Radiotherapy Open

Chaoqiong Ma, Xiaofeng Yang, Chih‐Wei Chang, Ruirui Liu, Duncan Bohannon , et al. · 2022

Ultra-high dose rate (FLASH) proton planning with only transmission beams (TBs) has limitations in normal tissue sparing. The single-energy spread-out Bragg peaks (SESOBPs) of FLASH dose rate have been demonstrated feasible for proton FLAS…

Measurement of the time structure of FLASH beams using prompt gamma rays and secondary neutrons as surrogates Open

Serdar Charyyev, Ruirui Liu, Xiaofeng Yang, Jun Zhou, Anees Dhabaan , et al. · 2022

We aim to investigate the feasibility of online monitoring of irradiation time (IRT) and scan time for FLASH radiotherapy using a pixelated semiconductor detector. Measurements of the time structure of FLASH irradiations were performed usi…

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