Runjia Ji
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View article: Magnetosome gene cluster containing bacteria in oxygen-stratified freshwater ecosystems of northern landscapes
Magnetosome gene cluster containing bacteria in oxygen-stratified freshwater ecosystems of northern landscapes Open
Magnetotactic bacteria (MTB) are capable of magnetic navigation (magnetotaxis) through the intracellular biomineralization of membrane-bound magnetic nanoparticles, known as magnetosomes, which are regulated by magnetosome gene clusters (M…
View article: Biomineralization in magnetotactic bacteria: From diversity to molecular discovery-based applications
Biomineralization in magnetotactic bacteria: From diversity to molecular discovery-based applications Open
The synthesis of magnetic nanoparticles (Fe3O4 or Fe3S4) within the membrane-bound organelles known as magnetosomes in magnetotactic bacteria (MTB) is a remarkable example of microbial-controlled…
View article: Linking morphology, genome, and metabolic activity of uncultured magnetotactic Nitrospirota at the single-cell level
Linking morphology, genome, and metabolic activity of uncultured magnetotactic Nitrospirota at the single-cell level Open
Background Magnetotactic bacteria (MTB) are a unique group of microorganisms that sense and navigate through the geomagnetic field by biomineralizing magnetic nanoparticles. MTB from the phylum Nitrospirota (previously known as Nitrospirae…
View article: MagCluster: a Tool for Identification, Annotation, and Visualization of Magnetosome Gene Clusters
MagCluster: a Tool for Identification, Annotation, and Visualization of Magnetosome Gene Clusters Open
Magnetosome gene clusters (MGCs), which are responsible for magnetosome biosynthesis and organization in magnetotactic bacteria (MTB), are the key to deciphering the mechanisms and evolutionary origin of magnetoreception, organelle biogene…
View article: Table S1 Seven reference MTB genomes used to generate the magnetosome-protein reference file
Table S1 Seven reference MTB genomes used to generate the magnetosome-protein reference file Open
Table S1 Seven reference MTB genomes used to generate the magnetosome-protein reference file
View article: Four MTB genomes used to validate MagCluster
Four MTB genomes used to validate MagCluster Open
Four MTB genomes used to validate MagCluster.
View article: Seven reference MTB genomes used for the generation of the magnetosome-protein reference file
Seven reference MTB genomes used for the generation of the magnetosome-protein reference file Open
Seven reference MTB genomes used for the generation of the magnetosome-protein reference file
View article: Magnetosome proteins from seven reference MTB genomes contained in MagCluster genome annotation reference file
Magnetosome proteins from seven reference MTB genomes contained in MagCluster genome annotation reference file Open
Seven reference MTB genomes used for the generation of the magnetosome-protein reference file
View article: Table S2 Four MTB genomes used to validate MagCluster
Table S2 Four MTB genomes used to validate MagCluster Open
Table S2 Four MTB genomes used to validate MagCluster
View article: Two Metagenome-Assembled Genome Sequences of Magnetotactic Bacteria in the Order <i>Magnetococcales</i>
Two Metagenome-Assembled Genome Sequences of Magnetotactic Bacteria in the Order <i>Magnetococcales</i> Open
Magnetotactic bacteria represent a valuable model system for the study of microbial biomineralization and magnetotaxis. Here, we report two metagenome-assembled genome sequences of uncultivated magnetotactic bacteria belonging to the order…