Scott Klasky
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View article: Stability-preserving Lossy Compression for Large-scale Partial Differential Equations
Stability-preserving Lossy Compression for Large-scale Partial Differential Equations Open
View article: CGSim: A Simulation Framework for Large Scale Distributed Computing Environment
CGSim: A Simulation Framework for Large Scale Distributed Computing Environment Open
View article: Error Analysis of Globally Distributed Workflow Management System
Error Analysis of Globally Distributed Workflow Management System Open
View article: Data Management System Analysis for Distributed Computing Workloads
Data Management System Analysis for Distributed Computing Workloads Open
View article: CGSim: A Simulation Framework for Large Scale Distributed Computing Environment
CGSim: A Simulation Framework for Large Scale Distributed Computing Environment Open
Large-scale distributed computing infrastructures such as the Worldwide LHC Computing Grid (WLCG) require comprehensive simulation tools for evaluating performance, testing new algorithms, and optimizing resource allocation strategies. How…
View article: Priority-BF: A Task Manager for Priority-Based Scheduling
Priority-BF: A Task Manager for Priority-Based Scheduling Open
View article: CAESAR: A Unified Framework for Foundation and Generative Models for Efficient Compression of Scientific Data
CAESAR: A Unified Framework for Foundation and Generative Models for Efficient Compression of Scientific Data Open
We introduce CAESAR, a new framework for scientific data reduction that stands for Conditional AutoEncoder with Super-resolution for Augmented Reduction. The baseline model, CAESAR-V, is built on a standard variational autoencoder with sca…
View article: HPC Campaign Management: Remote data access with user-defined error bound using ADIOS and ZFP
HPC Campaign Management: Remote data access with user-defined error bound using ADIOS and ZFP Open
View article: Optimising the processing and storage of visibilities using lossy compression
Optimising the processing and storage of visibilities using lossy compression Open
The next-generation radio astronomy instruments are providing a massive increase in sensitivity and coverage, largely through increasing the number of stations in the array and the frequency span sampled. The two primary problems encounter…
View article: Error-controlled Progressive Retrieval of Scientific Data under Derivable Quantities of Interest
Error-controlled Progressive Retrieval of Scientific Data under Derivable Quantities of Interest Open
The unprecedented amount of scientific data has introduced heavy pressure on the current data storage and transmission systems. Progressive compression has been proposed to mitigate this problem, which offers data access with on-demand pre…
View article: Optimising the Processing and Storage of Visibilities using lossy compression
Optimising the Processing and Storage of Visibilities using lossy compression Open
The next-generation radio astronomy instruments are providing a massive increase in sensitivity and coverage, through increased stations in the array and frequency span. Two primary problems encountered when processing the resultant avalan…
View article: FunM<sup>2</sup>C: A Filter for Uncertainty Visualization of Multivariate Data on Multi-Core Devices
FunM<sup>2</sup>C: A Filter for Uncertainty Visualization of Multivariate Data on Multi-Core Devices Open
Uncertainty visualization is an emerging research topic in data visualization because neglecting uncertainty in visualization can lead to inaccurate assessments. In this paper, we study the propagation of multivariate data uncertainty in v…
View article: A framework for compressing unstructured scientific data via serialization
A framework for compressing unstructured scientific data via serialization Open
We present a general framework for compressing unstructured scientific data with known local connectivity. A common application is simulation data defined on arbitrary finite element meshes. The framework employs a greedy topology preservi…
View article: Streaming Data in HPC Workflows Using ADIOS
Streaming Data in HPC Workflows Using ADIOS Open
The "IO Wall" problem, in which the gap between computation rate and data access rate grows continuously, poses significant problems to scientific workflows which have traditionally relied upon using the filesystem for intermediate storage…
View article: Enabling High- Throughput Parallel I/O in Particle-in-Cell Monte Carlo Simulations with openPMD and Darshan I/O Monitoring
Enabling High- Throughput Parallel I/O in Particle-in-Cell Monte Carlo Simulations with openPMD and Darshan I/O Monitoring Open
Large-scale HPC simulations of plasma dynamics in fusion devices require efficient parallel I/O to avoid slowing down the simulation and to enable the post-processing of critical information. Such complex simulations lacking parallel I/O c…
View article: A General Framework for Error-controlled Unstructured Scientific Data Compression
A General Framework for Error-controlled Unstructured Scientific Data Compression Open
Data compression plays a key role in reducing storage and I/O costs. Traditional lossy methods primarily target data on rectilinear grids and cannot leverage the spatial coherence in unstructured mesh data, leading to suboptimal compressio…
View article: A Personalized AI Assistant For Intuition-Driven Visual Explorations
A Personalized AI Assistant For Intuition-Driven Visual Explorations Open
View article: Uncertainty Visualization of Critical Points of 2D Scalar Fields for Parametric and Nonparametric Probabilistic Models
Uncertainty Visualization of Critical Points of 2D Scalar Fields for Parametric and Nonparametric Probabilistic Models Open
This paper presents a novel end-to-end framework for closed-form computation and visualization of critical point uncertainty in 2D uncertain scalar fields. Critical points are fundamental topological descriptors used in the visualization a…
View article: Lifting MGARD: construction of (pre)wavelets on the interval using polynomial predictors of arbitrary order
Lifting MGARD: construction of (pre)wavelets on the interval using polynomial predictors of arbitrary order Open
MGARD (MultiGrid Adaptive Reduction of Data) is an algorithm for compressing and refactoring scientific data, based on the theory of multigrid methods. The core algorithm is built around stable multilevel decompositions of conforming piece…
View article: Uncertainty Visualization of Critical Points of 2D Scalar Fields for Parametric and Nonparametric Probabilistic Models
Uncertainty Visualization of Critical Points of 2D Scalar Fields for Parametric and Nonparametric Probabilistic Models Open
This paper presents a novel end-to-end framework for closed-form computation and visualization of critical point uncertainty in 2D uncertain scalar fields. Critical points are fundamental topological descriptors used in the visualization a…
View article: US-UK fusion energy collaborations in the digital space
US-UK fusion energy collaborations in the digital space Open
The US and UK share the vision for fusion as a vital part of the clean energy future. This vision is reflected in the respective national plans in the form of the Bold Decadal Vision for Commercial Fusion (BDV) in the US and the Spherical …
View article: Scaling Ensembles of Data-Intensive Quantum Chemical Calculations for Millions of Molecules
Scaling Ensembles of Data-Intensive Quantum Chemical Calculations for Millions of Molecules Open
Deep learning models are efficient computational tools that can accelerate the inverse design of molecules with desired functional properties by generating predictions at a fraction of the time required by traditional quantum chemical appr…
View article: Optimizing Metadata Exchange: Leveraging DAOS for ADIOS Metadata I/O
Optimizing Metadata Exchange: Leveraging DAOS for ADIOS Metadata I/O Open
In HPC I/O middleware like the Adaptable I/O System (ADIOS) often mediates data transfers between applications. The metadata I/O generated by such systems often presents significant scaling and performance limitations. This work seeks impr…
View article: Machine Learning Techniques for Data Reduction of CFD Applications
Machine Learning Techniques for Data Reduction of CFD Applications Open
We present an approach called guaranteed block autoencoder that leverages Tensor Correlations (GBATC) for reducing the spatiotemporal data generated by computational fluid dynamics (CFD) and other scientific applications. It uses a multidi…
View article: Role of turbulent separatrix tangle in the improvement of the integrated pedestal and heat exhaust issue for stationary-operation tokamak fusion reactors
Role of turbulent separatrix tangle in the improvement of the integrated pedestal and heat exhaust issue for stationary-operation tokamak fusion reactors Open
The magnetic separatrix surface is designed to provide the final and critical confinement to the hot stationary-operation core plasma in modern tokamak reactors in the absence of an external magnetic perturbation (MP) or transient magneto-…
View article: Hybrid Approaches for Data Reduction of Spatiotemporal Scientific Applications
Hybrid Approaches for Data Reduction of Spatiotemporal Scientific Applications Open
Scientists conduct large-scale simulations to compute derived quantities from primary data. Thus, it is crucial that data compression techniques maintain bounded errors on these derived quantities or quantities of interest (QOI). For many …
View article: Performance Improvements of Poincaré Analysis for Exascale Fusion Simulations
Performance Improvements of Poincaré Analysis for Exascale Fusion Simulations Open
Understanding the time-varying magnetic field in a fusion device is critical for the successful design and construction of clean-burning fusion power plants. Poincaré analysis provides a powerful method for the visualization of magnetic fi…
View article: Fast Algorithms for Scientific Data Compression
Fast Algorithms for Scientific Data Compression Open
Many scientific simulations and experiments generate terabytes to petabytes of data daily, necessitating data compression techniques. Unlike video and image compression, scientists require methods that accurately preserve primary data (PD)…
View article: MGARD: A multigrid framework for high-performance, error-controlled data compression and refactoring
MGARD: A multigrid framework for high-performance, error-controlled data compression and refactoring Open
View article: Unraveling Diffusion in Fusion Plasma: A Case Study of In Situ Processing and Particle Sorting
Unraveling Diffusion in Fusion Plasma: A Case Study of In Situ Processing and Particle Sorting Open
This work starts an in situ processing capability to study a certain diffusion process in magnetic confinement fusion. This diffusion process involves plasma particles that are likely to escape confinement. Such particles carry a significa…