Shekhar Nagar
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View article: Integrated multi-platform approaches to gain insights into ecosystem’s fundamental ecology and habitat specific alterations
Integrated multi-platform approaches to gain insights into ecosystem’s fundamental ecology and habitat specific alterations Open
The increasing availability of metagenome-assembled genomes and environmental metagenomes provides unprecedented access to the metabolic potential and functional differences within the habitats. The hot spring microbiome with its diverse h…
View article: Monkeypox virus: phylogenomics, host–pathogen interactome and mutational cascade
Monkeypox virus: phylogenomics, host–pathogen interactome and mutational cascade Open
While the world is still recovering from the Covid-19 pandemic, monkeypox virus (MPXV) awaits to cause another global outbreak as a challenge to all of mankind. However, the Covid-19 pandemic has taught us a lesson to speed up the pace of …
View article: Monkey Pox Virus (MPXV): Phylogenomics, Host-Pathogen Interactome, and Mutational Cascade
Monkey Pox Virus (MPXV): Phylogenomics, Host-Pathogen Interactome, and Mutational Cascade Open
While the world is still managing to recover from Covid-19 pandemic, Monkeypox awaits to bring in another global outbreak as a challenge to the entire mankind. However, Covid-19 pandemic have taught us lessons to move fast in viral genomic…
View article: Microbial Ecology of Sulfur Biogeochemical Cycling at a Mesothermal Hot Spring Atop Northern Himalayas, India
Microbial Ecology of Sulfur Biogeochemical Cycling at a Mesothermal Hot Spring Atop Northern Himalayas, India Open
Sulfur related prokaryotes residing in hot spring present good opportunity for exploring the limitless possibilities of integral ecosystem processes. Metagenomic analysis further expands the phylogenetic breadth of these extraordinary sulf…
View article: Genome-resolved metagenomics reveals cohesive metabolic dynamics, metal resistance genes (MRGs) and biogeochemical cycling in a hot spring system
Genome-resolved metagenomics reveals cohesive metabolic dynamics, metal resistance genes (MRGs) and biogeochemical cycling in a hot spring system Open
The hot spring microbiome is a complex assemblage of micro- and macro- organisms, however, the understanding and projection of enzymatic repertoire that access earth’s integral ecosystem processes remains limited. The composite microbial c…
View article: Microbial ecology of sulfur biogeochemical cycling at a mesothermic hot spring atop Northern Himalayas, India
Microbial ecology of sulfur biogeochemical cycling at a mesothermic hot spring atop Northern Himalayas, India Open
Graphical Abstract Sulfur Related Prokaryotes (SRP) residing in hot spring present good opportunity for exploring the limitless possibilities of integral ecosystem processes. Metagenomic analysis further expand the phylogenetic breadth of …
View article: Metagenome-assembled genomes recovered from the datasets of a high-altitude Himalayan hot spring Khirganga, Himachal Pradesh, India
Metagenome-assembled genomes recovered from the datasets of a high-altitude Himalayan hot spring Khirganga, Himachal Pradesh, India Open
Khirganga, a pristine hot spring that lies in the Parvati Valley within the Northern Himalayas characterised with unique white colour microbial mat and divine water with healing abilities. Here, we report 41 metagenome-assembled genomes (M…
View article: Genome analyses of 174 strains of Mycobacterium tuberculosis provide insight into the evolution of drug resistance and reveal potential drug targets
Genome analyses of 174 strains of Mycobacterium tuberculosis provide insight into the evolution of drug resistance and reveal potential drug targets Open
Mycobacterium tuberculosis is a known human pathogen that causes the airborne infectious disease tuberculosis (TB). Every year TB infects millions of people worldwide. The emergence of multi-drug resistant (MDR), extensively drug resistant…
View article: Phylogenetic Relationships and Potential Functional Attributes of the Genus Parapedobacter: A Member of Family Sphingobacteriaceae
Phylogenetic Relationships and Potential Functional Attributes of the Genus Parapedobacter: A Member of Family Sphingobacteriaceae Open
The genus Parapedobacter was established to describe a novel genus within the family Sphingobacteriaceae and derives its name from Pedobacter, with which it is shown to be evolutionarily related. Despite this, Parapedobacter and Pedobacter…
View article: Comparative Genomic Analysis of Rapidly Evolving SARS-CoV-2 Reveals Mosaic Pattern of Phylogeographical Distribution
Comparative Genomic Analysis of Rapidly Evolving SARS-CoV-2 Reveals Mosaic Pattern of Phylogeographical Distribution Open
The COVID-19 pandemic continues to storm the world, with over 6.5 million cases worldwide. The severity of the disease varies with the territories and is mainly influenced by population density and age factor. In this study, we analyzed th…
View article: Draft Genome Sequence of <i>Deinococcus</i> sp. Strain S9, Isolated from Microbial Mat Deposits of Hot Springs Located atop the Himalayan Ranges at Manikaran, India
Draft Genome Sequence of <i>Deinococcus</i> sp. Strain S9, Isolated from Microbial Mat Deposits of Hot Springs Located atop the Himalayan Ranges at Manikaran, India Open
Here, we present the draft genome sequence of Deinococcus sp. strain S9, a red-pigmented and moderately thermophilic bacterium isolated from microbial mat deposits around the hot springs at Manikaran, Himachal Pradesh, India. The draft gen…
View article: Comparative Genomic Analysis Reveals Habitat-Specific Genes and Regulatory Hubs within the Genus <i>Novosphingobium</i>
Comparative Genomic Analysis Reveals Habitat-Specific Genes and Regulatory Hubs within the Genus <i>Novosphingobium</i> Open
This study highlights the significant role of the genetic repertoire of a microorganism in the similarity between Novosphingobium strains. The results suggest that the phylogenetic relationships were mostly influenced by metabolic trait en…