Shivam P. Agrawal
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View article: Genomic alterations and transcriptional phenotypes in circulating free DNA and matched metastatic tumor
Genomic alterations and transcriptional phenotypes in circulating free DNA and matched metastatic tumor Open
Background Profiling circulating cell-free DNA (cfDNA) has become a fundamental practice in cancer medicine, but the effectiveness of cfDNA at elucidating tumor-derived molecular features has not been systematically compared to standard si…
View article: Genomic alterations and transcriptional phenotypes in circulating tumor DNA and matched metastatic tumor
Genomic alterations and transcriptional phenotypes in circulating tumor DNA and matched metastatic tumor Open
Background Profiling circulating cell-free DNA (cfDNA) has become a fundamental practice in cancer medicine, but the effectiveness of cfDNA at elucidating tumor-derived molecular features has not been systematically compared to standard si…
View article: Nucleosome reorganisation in breast cancer tissues
Nucleosome reorganisation in breast cancer tissues Open
View article: Nucleosome reorganisation in breast cancer tissues
Nucleosome reorganisation in breast cancer tissues Open
Nucleosome repositioning in cancer is believed to cause many changes in genome organisation and gene expression. Understanding these changes is important to elucidate fundamental aspects of cancer. It is also important for medical diagnost…
View article: NucPosDB: a database of nucleosome positioning in vivo and nucleosomics of cell-free DNA
NucPosDB: a database of nucleosome positioning in vivo and nucleosomics of cell-free DNA Open
View article: NucPosDB: a database of nucleosome positioning <i>in vivo</i> and nucleosomics of cell-free DNA
NucPosDB: a database of nucleosome positioning <i>in vivo</i> and nucleosomics of cell-free DNA Open
Nucleosome positioning is involved in many gene regulatory processes happening in the cell and it may change as cells differentiate or respond to the changing microenvironment in a healthy or diseased organism. One important implication of…