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Exploring the uncharted seas: Metabolite profiling unleashes the anticancer properties of Oscillatoria salina Open

Bornita Das, Asharani Prusty, Subhajeet Dutta, Aditi Maulik, Yogita Dahat , et al. · 2024

Marine cyanobacteria offer a rich source of varied natural products with both chemical and biological diversity. Oscillatoria salina (O. salina) is a filamentous non-heterocystous marine cyanobacterium from Oscillatoriaceae f…

Entire datasets Open

Subhajeet Dutta, Sucheta Tripathy · 2021

This link contains the entire dataset of our comparative genome analysis of 128 Phytophthora isolates. It contains various types of files with different extensions such as: - 1. *.fna files are the draft genome fasta sequence files. 2. *.f…

All FIR files Open

Subhajeet Dutta, Sucheta Tripathy · 2021

This dataset contains all FIR files of 2SpeedGenome analysis.

All FIR files Open

Subhajeet Dutta, Sucheta Tripathy · 2021

This dataset contains all FIR files of 2SpeedGenome analysis.

Annotated Protein files of 120 Phytophthora genomes Open

Subhajeet Dutta, Sucheta Tripathy · 2021

These are the annotated protein files of 120 Phytophthora genomes

Annotated Protein files of 120 Phytophthora genomes Open

Subhajeet Dutta, Sucheta Tripathy · 2021

These are the annotated protein files of 120 Phytophthora genomes

Our predicted Crinkler (CRN) family effector proteins and the corresponding GFF3 files across 128 Phytophthora isolates Open

Subhajeet Dutta, Sucheta Tripathy · 2021

These files contain predicted Crinkler (CRN) family effector proteins and the corresponding GFF3 files across 128 Phytophthora isolates.

Our predicted Crinkler (CRN) family effector proteins and the corresponding GFF3 files across 128 Phytophthora isolates Open

Subhajeet Dutta, Sucheta Tripathy · 2021

These files contain predicted Crinkler (CRN) family effector proteins and the corresponding GFF3 files across 128 Phytophthora isolates.

JSON files containing parameters of training gene models for ab-initio prediction software Open

Subhajeet Dutta, Sucheta Tripathy · 2021

These are the JSON files containing parameters of training gene models for ab-initio prediction software. These training datasets are Phytophthora specific and can be further utilized for the gene prediction and annotation of other related…

JSON files containing parameters of training gene models for ab-initio prediction software Open

Subhajeet Dutta, Sucheta Tripathy · 2021

These are the JSON files containing parameters of training gene models for ab-initio prediction software. These training datasets are Phytophthora specific and can be further utilized for the gene prediction and annotation of other related…

GFF3 Annotation files for 120 Phytophthora genomes Open

Subhajeet Dutta, Sucheta Tripathy · 2021

The GFF3 files contain annotation data for 120 Phytophthora genomes.

GFF3 Annotation files for 120 Phytophthora genomes Open

Subhajeet Dutta, Sucheta Tripathy · 2021

The GFF3 files contain annotation data for 120 Phytophthora genomes.

RxLR EFFECTROR SEQUENCES ALONG WITH GFF3 FILES Open

Subhajeet Dutta, Sucheta Tripathy · 2021

Fasta sequences are the RxLR sequences of all 128 Phytophthora genomes. The GFF3 files contain the coordinates of the RxLRs.

GMATA derived ssr files containing Microsatellite data for 128 Phytophthora strains Open

Subhajeet Dutta, Sucheta Tripathy · 2021

These 128 files are GMATA software-derived .ssr files, containing Microsatellite data for each Phytophthora strain.

RxLR EFFECTROR SEQUENCES ALONG WITH GFF3 FILES Open

Subhajeet Dutta, Sucheta Tripathy · 2021

Fasta sequences are the RxLR sequences of all 128 Phytophthora genomes. The GFF3 files contain the coordinates of the RxLRs.

CDS files of 120 Phytophthora genomes Open

Subhajeet Dutta, Sucheta Tripathy · 2021

These are all ffn files containing CDS sequences of 120 Phytophthora genomes.

GMATA OUPUT SAT2 FILES FOR 128 PHYTOPHTHORA GENOMES Open

Subhajeet Dutta, Sucheta Tripathy · 2021

The uploaded 128 files are GMATA software derived sat2 files containing information regarding statistics of SSRs present in the genome.

GMATA derived ssr files containing Microsatellite data for 128 Phytophthora strains Open

Subhajeet Dutta, Sucheta Tripathy · 2021

These 128 files are GMATA software-derived .ssr files, containing Microsatellite data for each Phytophthora strain.

GMATA OUPUT SAT2 FILES FOR 128 PHYTOPHTHORA GENOMES Open

Subhajeet Dutta, Sucheta Tripathy · 2021

The uploaded 128 files are GMATA software derived sat2 files containing information regarding statistics of SSRs present in the genome.

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