Susanne Barth
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View article: Synthetic pyrethroids in European surface waters: sources, occurrence and need to reduce contamination
Synthetic pyrethroids in European surface waters: sources, occurrence and need to reduce contamination Open
Pyrethroids represent a class of highly potent insecticides characterised by their widespread use, extreme toxicity to non-target aquatic organisms, complex regulatory status, and the unique challenges they pose for environmental monitorin…
View article: Dynamic anaerobic digestion-based biorefineries for on-demand renewable energy and bioproducts in a circular bioeconomy
Dynamic anaerobic digestion-based biorefineries for on-demand renewable energy and bioproducts in a circular bioeconomy Open
Anaerobic digestion (AD) is an important biotechnology for treating biodegradable residues and producing bioenergy, yet its full potential remains untapped. We investigate a two-phase AD system for biorefinery applications, producing valua…
View article: Differential biomass and nutrient accumulation in perennial ryegrass accessions under excess water treatment in field conditions during winter
Differential biomass and nutrient accumulation in perennial ryegrass accessions under excess water treatment in field conditions during winter Open
Excess water is an abiotic stress in plants, but the level at which excess water becomes varies widely between plant species. We conducted a two growing season replicated excess flooding experiment that was planted with 24 accessions of pe…
View article: Environmental and landscape genomics of Picea sitchensis (Sitka spruce) reveals clusters of loci involved with both resistance to wintering and increases in height.
Environmental and landscape genomics of Picea sitchensis (Sitka spruce) reveals clusters of loci involved with both resistance to wintering and increases in height. Open
Picea sitchensis (Sitka spruce) occupies a large number of host environments across the Pacific Northwest, stretching from California to Alaska. Populations have become locally adapted to their environmental niche rather than undergoing sp…
View article: Characterization of mesosulfuron-methyl + iodosulfuron-methyl and pyroxsulam–resistant annual bluegrass (<i>Poa annua</i>) in an annual cropping system
Characterization of mesosulfuron-methyl + iodosulfuron-methyl and pyroxsulam–resistant annual bluegrass (<i>Poa annua</i>) in an annual cropping system Open
Herbicide-resistant annual bluegrass ( Poa annua L.) has become a problem in non-arable land areas. In arable fields, P. annua is frequently of lower priority in weed control program due to the variety of control options available and the …
View article: Demand-driven biogas production from Upflow Anaerobic Sludge Blanket (UASB) reactors to balance the power grid
Demand-driven biogas production from Upflow Anaerobic Sludge Blanket (UASB) reactors to balance the power grid Open
Future energy systems necessitate dispatchable renewable energy to balance electrical grids with high shares of intermittent renewables. Biogas from anaerobic digestion (AD) can generate electricity on-demand. High-rate methanogenic reacto…
View article: An innovative food system approach to diversifying protein intake: <scp>Protein‐I</scp>: Shared Island sustainable healthy nutrition
An innovative food system approach to diversifying protein intake: <span>Protein‐I</span>: Shared Island sustainable healthy nutrition Open
There is a need to transform our current food system if we are to feed the rapidly expanding global population while maintaining planetary health. Within the island of Ireland, there is an urgent need to diversify the foods that currently …
View article: Grass-weed challenges, herbicide resistance status and weed control practices across crop establishment systems in Ireland’s mild Atlantic climate
Grass-weed challenges, herbicide resistance status and weed control practices across crop establishment systems in Ireland’s mild Atlantic climate Open
The challenges of grass-weed control in a mild Atlantic climate, added to by the use of non-inversion tillage and limited herbicide options necessitated on-farm knowledge acquisition on grass weeds in Ireland. We surveyed 103 farms from 20…
View article: Genetic Diversity and Structure of a Diverse Population of Picea sitchensis Using Genotyping-by-Sequencing
Genetic Diversity and Structure of a Diverse Population of Picea sitchensis Using Genotyping-by-Sequencing Open
Picea sitchensis, Sitka spruce, is of interest to forestry as both a conservation species and a highly productive crop. Its native range stretches from Alaska to California, and it is hence distributed across a large environmental cline wi…
View article: A novel 3D X‐ray computed tomography (CT) method for spatio‐temporal evaluation of waterlogging‐induced aerenchyma formation in barley
A novel 3D X‐ray computed tomography (CT) method for spatio‐temporal evaluation of waterlogging‐induced aerenchyma formation in barley Open
Increased precipitation during winter months in Western Europe is predicted from climate change. This is expected to increase the frequency of flooding events, with waterlogged conditions becoming more prevalent. A consequence of waterlogg…
View article: First Detection and Characterization of Cross- and Multiple Resistance to Acetyl-CoA Carboxylase (ACCase)- and Acetolactate Synthase (ALS)-Inhibiting Herbicides in Black-Grass (Alopecurus myosuroides) and Italian Ryegrass (Lolium multiflorum) Populations from Ireland
First Detection and Characterization of Cross- and Multiple Resistance to Acetyl-CoA Carboxylase (ACCase)- and Acetolactate Synthase (ALS)-Inhibiting Herbicides in Black-Grass (Alopecurus myosuroides) and Italian Ryegrass (Lolium multiflorum) Populations from Ireland Open
Understanding the resistance spectrum and underlying genetic mechanisms is critical for managing herbicide-resistant populations. In this study, resistance to acetyl CoA carboxylase (ACCase) and acetolactate synthase (ALS) inhibitors was i…
View article: Physiological and transcriptional response to drought stress among bioenergy grass Miscanthus species
Physiological and transcriptional response to drought stress among bioenergy grass Miscanthus species Open
Background: Miscanthus is a commercial lignocellulosic biomass crop owing to its high biomass productivity, resilience and photosynthetic capacity at low temperature. These qualities make Miscanthus a particularly good candidate for temper…
View article: Persistency, yield, and silage quality of Festulolium cultivars over a consecutive five-year period under a mild Atlantic climate
Persistency, yield, and silage quality of Festulolium cultivars over a consecutive five-year period under a mild Atlantic climate Open
Festulolium are hybrids between species within the Lolium and Festuca genera. They are attractive candidates for hybridisation due to their complementary characteristics in the context of forage production and environmental challenges, wit…
View article: Additional file 6 of Physiological and transcriptional response to drought stress among bioenergy grass Miscanthus species
Additional file 6 of Physiological and transcriptional response to drought stress among bioenergy grass Miscanthus species Open
Additional file 6: Table S5. Differential expression analysis between drought and control conditions.
View article: Additional file 9 of Physiological and transcriptional response to drought stress among bioenergy grass Miscanthus species
Additional file 9 of Physiological and transcriptional response to drought stress among bioenergy grass Miscanthus species Open
Additional file 9: Table S7. Functional annotation of the M. sinensis genome with Gene Ontology (GO) terms.
View article: Additional file 11 of Physiological and transcriptional response to drought stress among bioenergy grass Miscanthus species
Additional file 11 of Physiological and transcriptional response to drought stress among bioenergy grass Miscanthus species Open
Additional file 11: Table S9. Enrichment analysis GO-SLIM: over-represented GO-SLIM annotations among genes differentially expressed during drought.
View article: Additional file 8 of Physiological and transcriptional response to drought stress among bioenergy grass Miscanthus species
Additional file 8 of Physiological and transcriptional response to drought stress among bioenergy grass Miscanthus species Open
Additional file 8: Table S6. Differential expression analysis between flooded and control conditions.
View article: Additional file 3 of Physiological and transcriptional response to drought stress among bioenergy grass Miscanthus species
Additional file 3 of Physiological and transcriptional response to drought stress among bioenergy grass Miscanthus species Open
Additional file 3: Table S2. Basic information on sequencing, processing and mapping of the RNA-Seq libraries.
View article: The occurrence of herbicide-resistant Avena fatua (wild oats) populations to ACCase-inhibiting herbicides in Ireland
The occurrence of herbicide-resistant Avena fatua (wild oats) populations to ACCase-inhibiting herbicides in Ireland Open
Following growers’ reports of herbicide control problems, populations of 30 wild oats, Avena fatua, were collected from the south-east main arable counties of Ireland in 2016 and investigated for the occurrence and potential for herbicide …
View article: Additional file 12 of Physiological and transcriptional response to drought stress among bioenergy grass Miscanthus species
Additional file 12 of Physiological and transcriptional response to drought stress among bioenergy grass Miscanthus species Open
Additional file 12: Table S10. Function, KEGG, and Arabidopsis thaliana homologous annotation for differentially expressed genes in significantly enriched GO categories.
View article: Additional file 5 of Physiological and transcriptional response to drought stress among bioenergy grass Miscanthus species
Additional file 5 of Physiological and transcriptional response to drought stress among bioenergy grass Miscanthus species Open
Additional file 5: Table S4. DEseq2-normalised gene read-counts per library.
View article: Additional file 16 of Physiological and transcriptional response to drought stress among bioenergy grass Miscanthus species
Additional file 16 of Physiological and transcriptional response to drought stress among bioenergy grass Miscanthus species Open
Additional file 16: Table S12. Candidate genes in the water/glycerol transport highlighted by our analysis.
View article: Additional file 10 of Physiological and transcriptional response to drought stress among bioenergy grass Miscanthus species
Additional file 10 of Physiological and transcriptional response to drought stress among bioenergy grass Miscanthus species Open
Additional file 10: Table S8. Enrichment analysis full GO: over-represented GO annotations among genes differentially expressed during drought.
View article: Additional file 4 of Physiological and transcriptional response to drought stress among bioenergy grass Miscanthus species
Additional file 4 of Physiological and transcriptional response to drought stress among bioenergy grass Miscanthus species Open
Additional file 4: Table S3. Gene read counts per library.
View article: Additional file 14 of Physiological and transcriptional response to drought stress among bioenergy grass Miscanthus species
Additional file 14 of Physiological and transcriptional response to drought stress among bioenergy grass Miscanthus species Open
Additional file 14: Table S11. Candidate genes in the starch and sucrose pathways highlighted by our analysis.
View article: First Report on Assessing the Severity of Herbicide Resistance to ACCase Inhibitors Pinoxaden, Propaquizafop and Cycloxydim in Six Avena fatua Populations in Ireland
First Report on Assessing the Severity of Herbicide Resistance to ACCase Inhibitors Pinoxaden, Propaquizafop and Cycloxydim in Six Avena fatua Populations in Ireland Open
In response to growers reports of poor weed control, resistance to ACCase inhibitors pinoxaden, propaquizafop and cycloxydim was investigated in populations of six wild oats, Avena fatua, collected from cereal-dominated crop rotations in I…
View article: Physiological and Transcriptional Response to Drought Stress Among Bioenergy Grass Miscanthus Species
Physiological and Transcriptional Response to Drought Stress Among Bioenergy Grass Miscanthus Species Open
Background: Miscanthus is a commercial lignocellulosic biomass crop owing to its high biomass productivity, particularly in the temperate regions. This study was conducted to elucidate physiological and molecular responses of four Miscanth…
View article: Transient Carbon Reserves in Barley: Malate, Sucrose and Starch Are the Main Players, Their Quantitative Involvement Being Light Intensity Dependant
Transient Carbon Reserves in Barley: Malate, Sucrose and Starch Are the Main Players, Their Quantitative Involvement Being Light Intensity Dependant Open
Under natural environment plants experience different light intensities which can affect photosynthesis and consequently the availability of carbohydrates for daytime growth and their transient storage to supply night growth. We grew a spr…
View article: Beyond ruminants: discussing opportunities for alternative pasture uses in New Zealand
Beyond ruminants: discussing opportunities for alternative pasture uses in New Zealand Open
The New Zealand government has set ambitious goals for primary sector growth and of zero net carbon emissions by 2050. This presents an opportunity and obligation to develop new ideas for grassland production systems to increase export val…
View article: Transcriptome characterization and differentially expressed genes under flooding and drought stress in the biomass grasses Phalaris arundinacea and Dactylis glomerata
Transcriptome characterization and differentially expressed genes under flooding and drought stress in the biomass grasses Phalaris arundinacea and Dactylis glomerata Open
Background and Aims Perennial grasses are a global resource as forage, and for alternative uses in bioenergy and as raw materials for the processing industry. Marginal lands can be valuable for perennial biomass grass production, if perenn…