Teodor Georgiev
YOU?
Author Swipe
View article: The Crete Declaration: Uniting Science for One Health
The Crete Declaration: Uniting Science for One Health Open
The interdependence of human, animal, plant and ecosystem health necessitates systemic, cross-domain collaboration to address global challenges, such as emerging diseases, climate change and biodiversity severe change. Through the Crete De…
View article: Scholarly publication of barcoding data
Scholarly publication of barcoding data Open
This presentation focuses on innovative approaches and best practices for the scholarly publication of barcoding data, emphasizing the importance of data publishing in academic contexts. It introduces the core principles of scholarly data …
View article: D1.1 BESTMAP website and web-based within-project communication system
D1.1 BESTMAP website and web-based within-project communication system Open
To promote and disseminate the BESTMAP research across stakeholders and the general public, and to raise awareness of the project findings, BESTMAP launched a website at the initial phase of the project. This report describes in detail the…
View article: From SIBiLS to Biodiversity PMC: Foundations for the One Health Library
From SIBiLS to Biodiversity PMC: Foundations for the One Health Library Open
One Health is an integrated, unifying approach that aims to sustainably balance and optimize the health of people, animals and ecosystems in compliance with the United Nations development goals (Dye 2022). However, premier life and health …
View article: Nanopublications for Biodiversity Go Live
Nanopublications for Biodiversity Go Live Open
A nanopublication is the smallest unit of publishable information: a scientifically meaningful assertion about anything that can be uniquely identified and attributed to its author(s) and serve to communicate a single statement, its origin…
View article: Pre-Publication Data Linking in Taxonomy and Biodiversity: The ARPHA and Metotaxa-Metostem Publishing Systems
Pre-Publication Data Linking in Taxonomy and Biodiversity: The ARPHA and Metotaxa-Metostem Publishing Systems Open
The traditional way of publishing in PDF makes it difficult to retrospectively convert the legacy literature into data. This presentation will discuss pre-publication tagging as an alternative solution for publishing FAIR (Findable, Access…
View article: OpenBiodiv for Users: Applications and Approaches to Explore a Biodiversity Knowledge Graph
OpenBiodiv for Users: Applications and Approaches to Explore a Biodiversity Knowledge Graph Open
OpenBiodiv is a biodiversity database—knowledge graph based on Resource Description Framework (RDF)—that contains information extracted from the scientific literature. It provides access to an ecosystem of tools and services, including a L…
View article: Deliverable D6.4 Applications for interoperable access to OpenBiodiv through semantically enhanced queries
Deliverable D6.4 Applications for interoperable access to OpenBiodiv through semantically enhanced queries Open
To the best of our knowledge, OpenBiodiv is the first production-stage semantic system running on top of a reasonably-sized biodiversity knowledge graph. It stores biodiversity data in a semantic interlinked format and offers facilities for …
View article: Deliverable D12.9 Data Management Plan
Deliverable D12.9 Data Management Plan Open
The main goal of the BiCIKL project is to improve, for the first time, seamless access, linking and usage tracking of data within a network of Research Infrastructures managing different data classes (literature, specimens, samples, occurren…
View article: Recommendations for use of annotations and persistent identifiers in taxonomy and biodiversity publishing
Recommendations for use of annotations and persistent identifiers in taxonomy and biodiversity publishing Open
The paper summarises many years of discussions and experience of biodiversity publishers, organisations, research projects and individual researchers, and proposes recommendations for implementation of persistent identifiers for article me…
View article: The OpenBiodiv Knowledge Graph Rebuilt: A semantic hub on top of the ARPHA-published content and the Biodiversity Literature Repository
The OpenBiodiv Knowledge Graph Rebuilt: A semantic hub on top of the ARPHA-published content and the Biodiversity Literature Repository Open
OpenBiodiv is a complex ecosystem of tools and services for RDF conversion of XML narratives of biodiversity articles including Darwin Core data into Linked Open Data (LOD), running on top of a graph database. OpenBiodiv provides four main…
View article: Infrastructure and Population of the OpenBiodiv Biodiversity Knowledge Graph
Infrastructure and Population of the OpenBiodiv Biodiversity Knowledge Graph Open
OpenBiodiv is a biodiversity knowledge graph containing a synthetic linked open dataset, OpenBiodiv-LOD, which combines knowledge extracted from academic literature with the taxonomic backbone used by the Global Biodiversity Information Fa…
View article: A Nano(publication) Approach Towards Big Data in Biodiversity
A Nano(publication) Approach Towards Big Data in Biodiversity Open
One of the major challenges in biodiversity informatics is the generation of machine-readable data that is interoperable between different biodiversity-related data infrastructures. Producers of such data have to comply with existing stand…
View article: OpenBiodiv Archive
OpenBiodiv Archive Open
OpenBiodiv is a Knowledge Graph for Literature-Extracted Linked Open Data in Biodiversity Science [1] and is available via http://openbiodiv.net . This data publication contains a single gzipped rdf/nquads archive of all of the OpenBiodiv …
View article: OpenBiodiv Archive
OpenBiodiv Archive Open
OpenBiodiv is a Knowledge Graph for Literature-Extracted Linked Open Data in Biodiversity Science [1] and is available via http://openbiodiv.net . This data publication contains a single gzipped rdf/nquads archive of all of the OpenBiodiv …
View article: A streamlined workflow for conversion, peer review, and publication of genomics metadata as omics data papers
A streamlined workflow for conversion, peer review, and publication of genomics metadata as omics data papers Open
The omics data paper structure and workflow for import of genomics metadata will help to bring genomic and other omics datasets into the spotlight. Promoting enhanced metadata descriptions and enforcing manuscript peer review and data audi…
View article: ASDASD Prep test
ASDASD Prep test Open
AS DAS
View article: Open science in practice: 300 published research ideas and outcomes illustrate how RIO Journal facilitates engagement with the research process
Open science in practice: 300 published research ideas and outcomes illustrate how RIO Journal facilitates engagement with the research process Open
Since Research Ideas and Outcomes was launched in late 2015, it has stimulated experimentation around the publication of and engagement with research processes, especially those with a strong open science component. Here, we zoom in on the…
View article: OpenBiodiv Archive
OpenBiodiv Archive Open
OpenBiodiv is a Knowledge Graph for Literature-Extracted Linked Open Data in Biodiversity Science [1] and is available via http://openbiodiv.net . This data publication contains a single gzipped rdf/nquads archive of all of the OpenBiodiv …
View article: Semantic Publishing Enables Text Mining of Biotic Interactions
Semantic Publishing Enables Text Mining of Biotic Interactions Open
Introduction Scholarly literature is the primary source for biodiversity knowledge based on observations, field work, analysis and taxonomic classification. Publishing such literature in semantically enhanced formats (e.g., through Extensi…
View article: Streamlined Conversion of Omics Metadata into Manuscript Facilitates Publishing and Reuse of Omics Data
Streamlined Conversion of Omics Metadata into Manuscript Facilitates Publishing and Reuse of Omics Data Open
Data papers have started to gain popularity as a publishing format that allows easy and quick publishing of research data (Chavan and Penev 2011, Penev et al. 2017). They describe single or multiple datasets and the methodologies required …
View article: The Pensoft Annotator: A new tool for text annotation with ontology terms
The Pensoft Annotator: A new tool for text annotation with ontology terms Open
Introduction Digitisation of biodiversity knowledge from collections, scholarly literature and various research documents is an ongoing mission of the Biodiversity Information Standards (TDWG) community. Organisations such as the Biodivers…
View article: A Streamlined Workflow for Conversion, Peer-Review and Publication of Omics Metadata as Omics Data Papers
A Streamlined Workflow for Conversion, Peer-Review and Publication of Omics Metadata as Omics Data Papers Open
Data papers have emerged as a powerful instrument for open data publishing, obtaining credit, and establishing priority for datasets generated in scientific experiments. Academic publishing improves data and metadata quality through peer-r…
View article: Test Test Test Beyond limits – the pitfalls of global gene drives for environmental risk assessment in the European Union
Test Test Test Beyond limits – the pitfalls of global gene drives for environmental risk assessment in the European Union Open
Test Test Test Beyond limits – the pitfalls of global gene drives for environmental risk assessment in the European Union
View article: OpenBiodiv Archive
OpenBiodiv Archive Open
OpenBiodiv is a Knowledge Graph for Literature-Extracted Linked Open Data in Biodiversity Science [1] and is available via http://openbiodiv.net . This data publication contains a single gzipped rdf/nquads archive of all of the OpenBiodiv …
View article: OpenBiodiv Archive
OpenBiodiv Archive Open
OpenBiodiv is a Knowledge Graph for Literature-Extracted Linked Open Data in Biodiversity Science [1] and is available via http://openbiodiv.net . This data publication contains a single gzipped rdf/nquads archive of all of the OpenBiodiv …
View article: Opening data and research objects in viticulture: The Viticulture Data Journal (VDJ)
Opening data and research objects in viticulture: The Viticulture Data Journal (VDJ) Open
The Viticulture Data Journal (VDJ) is launched with the aim of offering a publication venue for non-conventional but valuable outputs of the research cycle: data, models, methods, software, data analytics pipelines and visualisation method…
View article: Open Science meets Food Modelling: Introducing the Food Modelling Journal (FMJ)
Open Science meets Food Modelling: Introducing the Food Modelling Journal (FMJ) Open
This Editorial describes the rationale, focus, scope and technology behind the newly launched, open access, innovative Food Modelling Journal (FMJ). The Journal is designed to publish those outputs of the research cycle that usually preced…
View article: OpenBiodiv: Linking Type Materials, Institutions, Locations and Taxonomic Names Extracted From Scholarly Literature
OpenBiodiv: Linking Type Materials, Institutions, Locations and Taxonomic Names Extracted From Scholarly Literature Open
OpenBiodiv is a knowledge management system containing biodiversity knowledge extracted from scholarly literature: both recently published articles in Pensoft's journals and legacy (taxon treatments extracted by Plazi) (Senderov et al. 201…
View article: Biodiversity Literature Repository (BLR), a repository for FAIR data and publications
Biodiversity Literature Repository (BLR), a repository for FAIR data and publications Open
Scholarly publications in taxonomy are used as the sole carrier of the communication channel to publicize the description of new species, more generally any kind of taxon, their augmentations in form of re-descriptions to small notes such …