Urška Jamnikar-Ciglenečki
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View article: Virome analysis suggests deltacoronaviruses and picornaviruses as a probable cause of severe intestinal disease on three quail farms
Virome analysis suggests deltacoronaviruses and picornaviruses as a probable cause of severe intestinal disease on three quail farms Open
View article: Clostridioides Difficile Detected in Pasteurized Product Made from Mechanically Separated Poultry Meat
Clostridioides Difficile Detected in Pasteurized Product Made from Mechanically Separated Poultry Meat Open
View article: An international inter-laboratory study to compare digital PCR with ISO standardized qPCR assays for the detection of norovirus GI and GII in oyster tissue
An international inter-laboratory study to compare digital PCR with ISO standardized qPCR assays for the detection of norovirus GI and GII in oyster tissue Open
View article: Prevalence of red panda amdoparvovirus infection in European zoos
Prevalence of red panda amdoparvovirus infection in European zoos Open
Red panda amdoparvovirus (RPAV) was first described in captive red pandas ( Ailurus fulgens ) at a zoo in the United States in 2018. Subsequently, the prevalence of infection in zoos in the United States was reported to be 50%; however, RP…
View article: First Molecular Detection of Neospora caninum in Feces of Grey Wolf (Canis lupus) and Golden Jackal (Canis aureus) Populations in Slovenia
First Molecular Detection of Neospora caninum in Feces of Grey Wolf (Canis lupus) and Golden Jackal (Canis aureus) Populations in Slovenia Open
Neospora caninum is an obligate intracellular parasite that causes reproductive disorders and major economic losses in cattle, and induces neuromuscular disorders in canids. Exogenous infections are becoming increasingly important due to d…
View article: Food Safety Knowledge among Professional Food Handlers in Slovenia: The Results of a Nation-Wide Survey
Food Safety Knowledge among Professional Food Handlers in Slovenia: The Results of a Nation-Wide Survey Open
The authors present and discuss the results of a nation-wide survey on food safety knowledge among professional food handlers in Slovenia. The data were collected via a telephone survey using a well-established questionnaire adapted to the…
View article: Identification of a Novel Papillomavirus Type (MfoiPV1) Associated with Acrochordon in a Stone Marten (Martes foina)
Identification of a Novel Papillomavirus Type (MfoiPV1) Associated with Acrochordon in a Stone Marten (Martes foina) Open
Papillomaviruses (PVs) are an extremely large group of viruses that cause skin and mucosal infections in humans and various domestic and wild animals. Nevertheless, there is limited knowledge about PVs in wildlife hosts, including mustelid…
View article: A molecular survey and phylogenetic analysis of porcine circovirus type 3 using oral fluid, faeces and serum
A molecular survey and phylogenetic analysis of porcine circovirus type 3 using oral fluid, faeces and serum Open
View article: Molecular detection of porcine reproductive and respiratory syndrome virus, porcine circovirus 2 and hepatitis E virus in oral fluid compared to their detection in faeces and serum
Molecular detection of porcine reproductive and respiratory syndrome virus, porcine circovirus 2 and hepatitis E virus in oral fluid compared to their detection in faeces and serum Open
Background Porcine Reproductive and Respiratory Syndrome Virus (PRRSV), Porcine Circovirus Type 2 (PCV2) and Hepatitis E virus (HEV) are common and economically important viral disease causative agents detected in pig oral fluid (OF), faec…
View article: Molecular detection of Porcine Reproductive and Respiratory Syndrome Virus, Porcine Circovirus 2 and Hepatitis E Virus in oral fluid compared to their detection in faeces and serum.
Molecular detection of Porcine Reproductive and Respiratory Syndrome Virus, Porcine Circovirus 2 and Hepatitis E Virus in oral fluid compared to their detection in faeces and serum. Open
Background: Porcine Reproductive and Respiratory Syndrome Virus (PRRSV), Porcine Circovirus Type 2 (PCV2) and Hepatitis E virus (HEV) are common and economically important viral disease causative agents detected in pig oral fluid (OF), fae…
View article: A Molecular Survey and Phylogenetic Analysis of Porcine Circovirus Type 3 Using Oral Fluid, Faeces and Serum
A Molecular Survey and Phylogenetic Analysis of Porcine Circovirus Type 3 Using Oral Fluid, Faeces and Serum Open
Background: Porcine circovirus type 3 is the most recently discovered porcine circovirus, and an emerging pathogen. In this study the status of its presence on some Slovenian farms is reported. The effectiveness of the vaccine against porc…
View article: Clostridioides difficile in national food surveillance, Slovenia, 2015 to 2017
Clostridioides difficile in national food surveillance, Slovenia, 2015 to 2017 Open
Background Clostridioides difficile is an important human and animal intestinal pathogen. Because of increasing indications of an association between C. difficile and food, in 2015, the Administration of the Republic of Slovenia for Food S…
View article: Molecular detection of Porcine Reproductive and Respiratory Syndrome Virus, Porcine Circovirus 2 and Hepatitis E Virus in oral fluid compared to their detection in faeces and serum
Molecular detection of Porcine Reproductive and Respiratory Syndrome Virus, Porcine Circovirus 2 and Hepatitis E Virus in oral fluid compared to their detection in faeces and serum Open
Background Porcine Reproductive and Respiratory Syndrome Virus (PRRSV), Porcine Circovirus Type 2 (PCV2) and Hepatitis E virus (HEV) are common and economically important viral disease causative agents detected in pig oral fluid (OF), faec…
View article: A molecular survey, whole genome sequencing and phylogenetic analysis of astroviruses from roe deer
A molecular survey, whole genome sequencing and phylogenetic analysis of astroviruses from roe deer Open
View article: Domuzlarda Antemortem Muayenedeki Klinik Bulgular İle Postmortem Muayenede Belirlenen Patolojik Lezyonların Tutarlılığı
Domuzlarda Antemortem Muayenedeki Klinik Bulgular İle Postmortem Muayenede Belirlenen Patolojik Lezyonların Tutarlılığı Open
The aim of this study was to examine the relationship between clinical symptoms recorded during the antemortem inspection in the lairage and pathological lesions at postmortem inspection of slaughter pigs. If clinical symptoms were an accu…
View article: Molecular detection of Porcine Reproductive and Respiratory Syndrome Virus, Porcine Circovirus 2 and Hepatitis E Virus in oral fluid compared to detection in faeces and serum.
Molecular detection of Porcine Reproductive and Respiratory Syndrome Virus, Porcine Circovirus 2 and Hepatitis E Virus in oral fluid compared to detection in faeces and serum. Open
Background Porcine Reproductive and Respiratory Syndrome Virus (PRRSV), Porcine Circovirus Type 2 (PCV2) and Hepatitis E virus (HEV) are common and economically important viral disease causative agents detected in pig oral fluid (OF), faec…
View article: High detection rate and high genetic diversity of genogroup I Picobirnaviruses from roe deer
High detection rate and high genetic diversity of genogroup I Picobirnaviruses from roe deer Open
View article: Effect of Composting Under Semipermeable Film on the Sewage Sludge Virome
Effect of Composting Under Semipermeable Film on the Sewage Sludge Virome Open
View article: Impact of various housing conditions on the occurrence of pathological lesions in slaughtered pigs
Impact of various housing conditions on the occurrence of pathological lesions in slaughtered pigs Open
Introduction. This study assessed the effect of farming system, feeding system, floor type, housing density and gender on the occurrence of pathological lesions in slaughtered pigs. Materials and Methods. The study was conducted on 400 pig…
View article: Genetic Diversity of Deformed Wing Virus From <i>Apis mellifera carnica</i> (Hymenoptera: Apidae) and Varroa Mite (Mesostigmata: Varroidae)
Genetic Diversity of Deformed Wing Virus From <i>Apis mellifera carnica</i> (Hymenoptera: Apidae) and Varroa Mite (Mesostigmata: Varroidae) Open
Deformed wing virus (DWV) is one of the most widespread viruses that infect honey bee colonies. The route of infection is directly through contaminated food, feces, and air, or indirectly through the varroa mite, which acts as a vector. Po…
View article: Identification of novel reassortant mammalian orthoreoviruses from bats in Slovenia
Identification of novel reassortant mammalian orthoreoviruses from bats in Slovenia Open
View article: Risk factors associated with fecal shedding of<i><scp>L</scp>isteria monocytogenes</i>by dairy cows and calves
Risk factors associated with fecal shedding of<i><span>L</span>isteria monocytogenes</i>by dairy cows and calves Open
Background Listeria monocytogenes (LM) is an important foodborne pathogen affecting animals and humans. Listeriosis outbreaks in humans caused by consumption of unpasteurized dairy products are of serious concern. Objective To determine ri…
View article: Complete Genome Sequence of Roe Deer Picobirnavirus Strain PBV/roe_deer/SLO/D38-14/2014
Complete Genome Sequence of Roe Deer Picobirnavirus Strain PBV/roe_deer/SLO/D38-14/2014 Open
Picobirnaviruses (PBVs) have been detected in feces from various animal species and humans. Here, we report the complete genome sequence of the PBV/roe_deer/SLO/D38-14/2014 strain, which is the first PBV detected in roe deer, providing add…
View article: Whole genome sequence and a phylogenetic analysis of the G8P[14] group A rotavirus strain from roe deer
Whole genome sequence and a phylogenetic analysis of the G8P[14] group A rotavirus strain from roe deer Open
View article: Detection and Whole-Genome Analysis of a Zoonotic G8P[14] Rotavirus Strain Isolated from a Child with Diarrhea
Detection and Whole-Genome Analysis of a Zoonotic G8P[14] Rotavirus Strain Isolated from a Child with Diarrhea Open
The group A rotavirus strain SI-2987/09 was detected in a child with severe diarrhea. The whole-genome analysis revealed the G8-P[14]-I2-R2-C2-M2-A3-N2-T6-E2-H3 genome constellation, which reflects the zoonotic transmission of the strain m…
View article: Complete Genome of Chronic Bee Paralysis Virus Strain SLO/M92/2010, Detected from Apis mellifera <i>carnica</i>
Complete Genome of Chronic Bee Paralysis Virus Strain SLO/M92/2010, Detected from Apis mellifera <i>carnica</i> Open
Chronic bee paralysis virus (CBPV) causes an infectious and contagious disease of adult honeybees. Here, we report the complete genome sequence of CBPV strain SLO/M92/2010. This is the first published complete genome of CBPV in Apis mellif…