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View article: PopSparse: Accelerated block sparse matrix multiplication on IPU
PopSparse: Accelerated block sparse matrix multiplication on IPU Open
Reducing the computational cost of running large scale neural networks using sparsity has attracted great attention in the deep learning community. While much success has been achieved in reducing FLOP and parameter counts while maintainin…
View article: Twelve years of SAMtools and BCFtools.
Twelve years of SAMtools and BCFtools. Open
BACKGROUND: SAMtools and BCFtools are widely used programs for processing and analysing high-throughput sequencing data. They include tools for file format conversion and manipulation, sorting, querying, statistics, variant calling, and ef…
View article: HTSlib: C library for reading/writing high-throughput sequencing data
HTSlib: C library for reading/writing high-throughput sequencing data Open
Background Since the original publication of the VCF and SAM formats, an explosion of software tools have been created to process these data files. To facilitate this a library was produced out of the original SAMtools implementation, with…
View article: Twelve years of SAMtools and BCFtools
Twelve years of SAMtools and BCFtools Open
Background SAMtools and BCFtools are widely used programs for processing and analysing high-throughput sequencing data. They include tools for file format conversion and manipulation, sorting, querying, statistics, variant calling, and eff…
View article: HTSlib - C library for reading/writing high-throughput sequencing data
HTSlib - C library for reading/writing high-throughput sequencing data Open
Background Since the original publication of the VCF and SAM formats, an explosion of software tools have been created to process these data files. To facilitate this a library was produced out of the original SAMtools implementation, with…