Weihao Ge
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View article: Genomic prediction of cereal crop architectural traits using models informed by gene regulatory circuitries from maize
Genomic prediction of cereal crop architectural traits using models informed by gene regulatory circuitries from maize Open
Plant architecture is a major determinant of planting density, which enhances productivity potential for crops per unit area. Genomic prediction is well positioned to expedite genetic gain of plant architectural traits since they are typic…
View article: Genomic prediction of cereal crop architecture traits using models informed by gene regulatory circuitries from maize
Genomic prediction of cereal crop architecture traits using models informed by gene regulatory circuitries from maize Open
Plant architecture is a major determinant of planting density, which enhances productivity potential for crops per unit area. Genomic prediction is well-positioned to expedite genetic gain of plant architecture traits since they are typica…
View article: Two-step light gradient boosted model to identify human west nile virus infection risk factor in Chicago
Two-step light gradient boosted model to identify human west nile virus infection risk factor in Chicago Open
West Nile virus (WNV), a flavivirus transmitted by mosquito bites, causes primarily mild symptoms but can also be fatal. Therefore, predicting and controlling the spread of West Nile virus is essential for public health in endemic areas. W…
View article: Two-Step Light Gradient Boosted Model to identify human West Nile Virus infection risk factor in Chicago
Two-Step Light Gradient Boosted Model to identify human West Nile Virus infection risk factor in Chicago Open
West Nile virus (WNV), a flavivirus transmitted by mosquito bites, causes primarily mild symptoms but can also be fatal. Therefore, predicting and controlling the spread of West Nile virus is essential for public health in endemic areas. W…
View article: Feature Pyramid U-Net with Attention for Semantic Segmentation of Forward-Looking Sonar Images
Feature Pyramid U-Net with Attention for Semantic Segmentation of Forward-Looking Sonar Images Open
Forward-looking sonar is a technique widely used for underwater detection. However, most sonar images have underwater noise and low resolution due to their acoustic properties. In recent years, the semantic segmentation model U-Net has sho…
View article: Health disparities research is enabled by data diversity but requires much tighter integration of collaborative efforts
Health disparities research is enabled by data diversity but requires much tighter integration of collaborative efforts Open
View article: Systems Biology Understanding of the Effects of Lithium on Cancer
Systems Biology Understanding of the Effects of Lithium on Cancer Open
Lithium has many widely varying biochemical and phenomenological effects, suggesting that a systems biology approach is required to understand its action. Multiple lines of evidence point to lithium as a significant factor in development o…
View article: Using Optimal F-Measure and Random Resampling in Gene Ontology Enrichment Calculations
Using Optimal F-Measure and Random Resampling in Gene Ontology Enrichment Calculations Open
Background: A central question in bioinformatics is how to minimize arbitrariness and bias in analysis of patterns of enrichment in data. A prime example of such a question is enrichment of gene ontology (GO) classes in lists of genes. Our…
View article: Systems Biology Understanding of the Effects of Lithium on Affective and Neurodegenerative Disorders
Systems Biology Understanding of the Effects of Lithium on Affective and Neurodegenerative Disorders Open
Lithium has many widely varying biochemical and phenomenological effects, suggesting that a systems biology approach is required to understand its action. Multiple lines of evidence point to lithium intake and consequent blood levels as im…
View article: An assessment of true and false positive detection rates of stepwise epistatic model selection as a function of sample size and number of markers
An assessment of true and false positive detection rates of stepwise epistatic model selection as a function of sample size and number of markers Open
View article: Optimization, random resampling, and modeling in bioinformatics
Optimization, random resampling, and modeling in bioinformatics Open
Quantitative phenotypes regulated by multiple genes are prevalent in nature and many diseases falls into this category. High-throughput sequencing and high-performance computing provides a basis to understand quantitative phenotypes. Howev…
View article: Systems Biology Understanding of the Effects of Lithium on Cancer
Systems Biology Understanding of the Effects of Lithium on Cancer Open
Lithium has many widely varying biochemical and phenomenological effects, suggesting that a systems biology approach is required to understand its action. Multiple lines of evidence point to lithium as a significant factor in development o…
View article: Using Optimal F-Measure and Random Resampling in Gene Ontology Enrichment Calculations
Using Optimal F-Measure and Random Resampling in Gene Ontology Enrichment Calculations Open
Background A central question in bioinformatics is how to minimize arbitrariness and bias in analysis of patterns of enrichment in data. A prime example of such a question is enrichment of gene ontology (GO) classes in lists of genes. Our …