Weijian Zhuang
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View article: Identification and Characterization of SWEET Gene Family in Peanuts and the Role of AhSWEET50 in Sugar Accumulation
Identification and Characterization of SWEET Gene Family in Peanuts and the Role of AhSWEET50 in Sugar Accumulation Open
The SWEET (sugars will eventually be exported transporter) gene family represents a novel class of sugar transporters capable of bidirectionally transporting sugars along the concentration gradient. In this study, we identified 50 SWEET ge…
View article: Design, synthesis and activity evaluation of dual-target inhibitors against papain-like and main proteases of porcine epidemic diarrhea virus
Design, synthesis and activity evaluation of dual-target inhibitors against papain-like and main proteases of porcine epidemic diarrhea virus Open
In summary, a potent dual-targeted inhibitor of PLpro and Mpro, f2, was designed, synthesized, and found to be effective in the inhibition of PEDV replication and inflammatory response in vitro and in vivo.
View article: Genome-Wide Identification and Expression Analysis of TCP Transcription Factors Responding to Multiple Stresses in Arachis hypogaea L.
Genome-Wide Identification and Expression Analysis of TCP Transcription Factors Responding to Multiple Stresses in Arachis hypogaea L. Open
The TEOSINTE-BRANCHED1/CYCLOIDEA/PROLIFERATING-CELL-FACTOR (TCP) gene family, a plant-specific transcription factor family, plays pivotal roles in various processes such as plant growth and development regulation, hormone crosstalk, and st…
View article: Molecular Cloning and Functional Identification of a Pericarp- and Testa-Abundant Gene’s (AhN8DT-2) Promoter from Arachis hypogaea
Molecular Cloning and Functional Identification of a Pericarp- and Testa-Abundant Gene’s (AhN8DT-2) Promoter from Arachis hypogaea Open
Cultivated peanut (Arachis hypogaea L.) is a key oil- and protein-providing legume crop of the world. It is full of nutrients, and its nutrient profile is comparable to that of other nuts. Peanut is a unique plant as it showcases a pegging…
View article: Multiple strategies, including 6mA methylation, affecting plant alternative splicing in allopolyploid peanut
Multiple strategies, including 6mA methylation, affecting plant alternative splicing in allopolyploid peanut Open
Summary Alternative splicing (AS), an important post‐transcriptional regulation mechanism in eukaryotes, can significantly increase transcript diversity and contribute to gene expression regulation and many other complicated developmental …
View article: Comprehensive in-silico characterization and expression analysis of UbiA prenyltransferase genes in peanut (Arachis hypogaea L.) against abiotic stresses
Comprehensive in-silico characterization and expression analysis of UbiA prenyltransferase genes in peanut (Arachis hypogaea L.) against abiotic stresses Open
Genes of the UbiA prenyltransferase family play key roles in secondary metabolites synthesis and biotic and abiotic stress tolerance through different metabolic pathways. Currently, there is a notable lack of comprehensive information on t…
View article: Genome-Wide Investigation of Apyrase (APY) Genes in Peanut (Arachis hypogaea L.) and Functional Characterization of a Pod-Abundant Expression Promoter AhAPY2-1p
Genome-Wide Investigation of Apyrase (APY) Genes in Peanut (Arachis hypogaea L.) and Functional Characterization of a Pod-Abundant Expression Promoter AhAPY2-1p Open
Peanut (Arachis hypogaea L.) is an important food and feed crop worldwide and is affected by various biotic and abiotic stresses. The cellular ATP levels decrease significantly during stress as ATP molecules move to extracellular spaces, r…
View article: Whole genome resequencing identifies candidate genes and allelic diagnostic markers for resistance to Ralstonia solanacearum infection in cultivated peanut (Arachis hypogaea L.)
Whole genome resequencing identifies candidate genes and allelic diagnostic markers for resistance to Ralstonia solanacearum infection in cultivated peanut (Arachis hypogaea L.) Open
Bacterial wilt disease (BWD), caused by Ralstonia solanacearum is a major challenge for peanut production in China and significantly affects global peanut field productivity. It is imperative to identify genetic loci and putative genes con…
View article: Bayesian Phylogeographic Inference Suggests Japan as the Center for the Origin and Dissemination of Rice Stripe Virus
Bayesian Phylogeographic Inference Suggests Japan as the Center for the Origin and Dissemination of Rice Stripe Virus Open
Rice stripe virus (RSV) is one of the most important viral pathogens of rice in East Asia. The origin and dispersal of RSV remain poorly understood, but an emerging hypothesis suggests that: (i) RSV originates from Yunnan, a southwest prov…
View article: Comprehensive genome sequence analysis of the devastating tobacco bacterial phytopathogen Ralstonia solanacearum strain FJ1003
Comprehensive genome sequence analysis of the devastating tobacco bacterial phytopathogen Ralstonia solanacearum strain FJ1003 Open
Due to its high genetic diversity and broad host range, Ralstonia solanacearum , the causative phytopathogen of the bacterial wilt (BW) disease, is considered a “species complex”. The R. solanacearum strain FJ1003 belonged to phylotype I, …
View article: Identification of Key Gene Networks and Deciphering Transcriptional Regulators Associated With Peanut Embryo Abortion Mediated by Calcium Deficiency
Identification of Key Gene Networks and Deciphering Transcriptional Regulators Associated With Peanut Embryo Abortion Mediated by Calcium Deficiency Open
Peanut embryo development is easily affected by a variety of nutrient elements in the soil, especially the calcium level. Peanut produces abortive embryos in calcium-deficient soil, but underlying mechanism remains unclear. Thus, identifyi…
View article: Cloning and Functional Characterization of a Pericarp Abundant Expression Promoter (AhGLP17-1P) From Peanut (Arachis hypogaea L.)
Cloning and Functional Characterization of a Pericarp Abundant Expression Promoter (AhGLP17-1P) From Peanut (Arachis hypogaea L.) Open
Peanut ( Arachis hypogaea L.) is an important oil and food legume crop grown in tropical and subtropical areas of the world. As a geocarpic crop, it is affected by many soil-borne diseases and pathogens. The pericarp, an inedible part of t…
View article: Chromosome-length genome assemblies of six legume species provide insights into genome organization, evolution, and agronomic traits for crop improvement
Chromosome-length genome assemblies of six legume species provide insights into genome organization, evolution, and agronomic traits for crop improvement Open
This study reports chromosome-length genome assemblies of six legume species and demonstrates the utility of these assemblies in crop improvement. The genomic resources developed here will have significant role in accelerating genetic impr…
View article: Complete genome sequence analysis of the peanut pathogen Ralstonia solanacearum strain Rs-P.362200
Complete genome sequence analysis of the peanut pathogen Ralstonia solanacearum strain Rs-P.362200 Open
Background Bacterial wilt caused by Ralstonia solanacearum species complex is an important soil-borne disease worldwide that affects more than 450 plant species, including peanut, leading to great yield and quality losses. However, there a…
View article: Metabolomics Intervention Towards Better Understanding of Plant Traits
Metabolomics Intervention Towards Better Understanding of Plant Traits Open
The majority of the most economically important plant and crop species are enriched with the availability of high-quality reference genome sequences forming the basis of gene discovery which control the important biochemical pathways. The …
View article: Additional file 4 of Complete genome sequence analysis of the peanut pathogen Ralstonia solanacearum strain Rs-P.362200
Additional file 4 of Complete genome sequence analysis of the peanut pathogen Ralstonia solanacearum strain Rs-P.362200 Open
Additional file 4: Supplementary 4. The strain information used to construct the phylogenetic tree.
View article: Additional file 2 of Complete genome sequence analysis of the peanut pathogen Ralstonia solanacearum strain Rs-P.362200
Additional file 2 of Complete genome sequence analysis of the peanut pathogen Ralstonia solanacearum strain Rs-P.362200 Open
Additional file 2: Supplementary 2. The distribution of specific effector proteins in Ralstonia solanacearum species complex.
View article: Additional file 8 of Complete genome sequence analysis of the peanut pathogen Ralstonia solanacearum strain Rs-P.362200
Additional file 8 of Complete genome sequence analysis of the peanut pathogen Ralstonia solanacearum strain Rs-P.362200 Open
Additional file 8: Supplementary 8-1. Comparative of HA4-1 and Rs-P.362200 genomic features. Supplementary 8-2. Analysis of genes in genomic pathogenicity islands. Supplementary 8-3. Analysis of genes in prophages.
View article: Additional file 3 of Complete genome sequence analysis of the peanut pathogen Ralstonia solanacearum strain Rs-P.362200
Additional file 3 of Complete genome sequence analysis of the peanut pathogen Ralstonia solanacearum strain Rs-P.362200 Open
Additional file 3: Supplementary 3. Type III secretion system and other virulence factors.
View article: Transcriptome Analysis Identified Coordinated Control of Key Pathways Regulating Cellular Physiology and Metabolism upon Aspergillus flavus Infection Resulting in Reduced Aflatoxin Production in Groundnut
Transcriptome Analysis Identified Coordinated Control of Key Pathways Regulating Cellular Physiology and Metabolism upon Aspergillus flavus Infection Resulting in Reduced Aflatoxin Production in Groundnut Open
Aflatoxin-affected groundnut or peanut presents a major global health issue to both commercial and subsistence farming. Therefore, understanding the genetic and molecular mechanisms associated with resistance to aflatoxin production during…
View article: Ectopic Expression of AhGLK1b (GOLDEN2-like Transcription Factor) in Arabidopsis Confers Dual Resistance to Fungal and Bacterial Pathogens
Ectopic Expression of AhGLK1b (GOLDEN2-like Transcription Factor) in Arabidopsis Confers Dual Resistance to Fungal and Bacterial Pathogens Open
GOLDEN2-LIKE (GLK) is a member of the myeloblastosis (MYB) family transcription factor and it plays an important role in the regulation of plastid development and stress tolerance. In this study, a gene named AhGLK1b was identified from a …
View article: <i>Arachis hypogaea</i> gene expression atlas for <i>fastigiata</i> subspecies of cultivated groundnut to accelerate functional and translational genomics applications
<i>Arachis hypogaea</i> gene expression atlas for <i>fastigiata</i> subspecies of cultivated groundnut to accelerate functional and translational genomics applications Open
Summary Spatio‐temporal and developmental stage‐specific transcriptome analysis plays a crucial role in systems biology‐based improvement of any species. In this context, we report here the Arachis hypogaea gene expression atlas (AhGEA) fo…
View article: Functional Biology and Molecular Mechanisms of Host-Pathogen Interactions for Aflatoxin Contamination in Groundnut (Arachis hypogaea L.) and Maize (Zea mays L.)
Functional Biology and Molecular Mechanisms of Host-Pathogen Interactions for Aflatoxin Contamination in Groundnut (Arachis hypogaea L.) and Maize (Zea mays L.) Open
Aflatoxins are secondary metabolites produced by soilborne saprophytic fungus Aspergillus flavus and closely related species that infect several agricultural commodities including groundnut and maize. The consumption of contaminated…
View article: Genome-wide development of polymorphic microsatellite markers and their application in peanut breeding program
Genome-wide development of polymorphic microsatellite markers and their application in peanut breeding program Open
View article: Overexpression of the peanut CLAVATA1-like leucine-rich repeat receptor-like kinase AhRLK1 confers increased resistance to bacterial wilt in tobacco
Overexpression of the peanut CLAVATA1-like leucine-rich repeat receptor-like kinase AhRLK1 confers increased resistance to bacterial wilt in tobacco Open
Overexpression of a novel peanut CLAVATA1-like gene significantly enhanced the resistance to Ralstonia solanacearum in tobacco via defense response signaling associated with EDS1-mediated R-gene pathways.
View article: Integrated microRNA and transcriptome profiling reveals a miRNA-mediated regulatory network of embryo abortion under calcium deficiency in peanut (Arachis hypogaea L.)
Integrated microRNA and transcriptome profiling reveals a miRNA-mediated regulatory network of embryo abortion under calcium deficiency in peanut (Arachis hypogaea L.) Open
View article: The genome of cultivated peanut provides insight into legume karyotypes, polyploid evolution and crop domestication
The genome of cultivated peanut provides insight into legume karyotypes, polyploid evolution and crop domestication Open
High oil and protein content make tetraploid peanut a leading oil and food legume. Here we report a high-quality peanut genome sequence, comprising 2.54 Gb with 20 pseudomolecules and 83,709 protein-coding gene models. We characterize gene…
View article: <i>AhRLK1</i>, a<i>CLAVATA1</i>-like leucine-rich repeat receptor-like kinase of peanut, confers increased resistance to bacterial wilt in tobacco
<i>AhRLK1</i>, a<i>CLAVATA1</i>-like leucine-rich repeat receptor-like kinase of peanut, confers increased resistance to bacterial wilt in tobacco Open
Bacterial wilt caused by Ralstonia solanacearum is a devastating disease that infects hundreds of plant species. Host factors involved in disease resistance and pathogenesis remain poorly characterized. An up regulated and leucine-rich rep…
View article: Proteome analysis of Aspergillus flavus isolate-specific responses to oxidative stress in relationship to aflatoxin production capability
Proteome analysis of Aspergillus flavus isolate-specific responses to oxidative stress in relationship to aflatoxin production capability Open
Aspergillus flavus is an opportunistic pathogen of plants such as maize and peanut under conducive conditions such as drought stress resulting in significant aflatoxin production. Drought-associated oxidative stress also exacerbates aflato…
View article: Oxidative stress and carbon metabolism influence Aspergillus flavus transcriptome composition and secondary metabolite production
Oxidative stress and carbon metabolism influence Aspergillus flavus transcriptome composition and secondary metabolite production Open