Explanipedia

Structure Alignment-driven Cross-Graph Modeling for Functional RNA Design Open

Xiaoyong Pan, Xiaoyong Pan, Jun Wang, Xiaojian Liu, Weimin Zhu , et al. · 2025

RNAs are critical for biological processes, with their biological functions closely tied to their three-dimensional structures. RNA inverse folding, the design of RNA sequences that fold into target 3D structures, is a complex challenge du…

Joint surveillance and correlation analysis of antimicrobial resistance and consumption of seven targeted bacteria, 2017–2023 Open

Qiao Yuan, Weimin Zhu, Zhe Yuan, Qianqian Zeng · 2025

Association between exposure to air pollutants and NAFLD/MAFLD: a meta-analysis Open

Feihu Zhang, Weimin Zhu, Hongyu Zhou, Zhixuan Wu · 2025

Understanding the impact of air pollution on NAFLD is critical for developing targeted public health policies and prevention strategies, particularly in urbanized regions with high pollution levels.

Information quality of videos related to esophageal cancer on tiktok, kwai, and bilibili: a cross-sectional study Open

Weimin Zhu, B H He, Xinyuan Wang, Yanjun Du, Kathleen Young , et al. · 2025

Surface Charged Polystyrene Nanoplastics Regulate Acidogenesis Metabolism Open

Jing Wang, Weimin Zhu, X Zhang, Sitong Liu, Jun Ma , et al. · 2025

Surface Charged Polystyrene Nanoplastics Regulate Acidogenesis Metabolism of Ethanoligenens harbinense Open

Jing Wang, Weimin Zhu, X Zhang, Sitong Liu, Jun Ma , et al. · 2025

Characterisation of the volatile compounds in nine varieties and three breeding selections of celery using GC–IMS and GC–MS Open

Jun Yan, Jingbo Chen, Huang Zhiwu, Lizhong He, Ling‐Yun Wu , et al. · 2024

WRKY transcription factor 40 from eggplant (Solanum melongena L.) regulates ABA and salt stress responses Open

Aidong Zhang, Jing Shang, Kai Xiao, Min Zhang, Shengjie Wang , et al. · 2024

Plants are affected by many environmental factors during their various stages of growth, among which salt stress is a key factor. WRKY transcription factors play important roles in the response to stress in plants. In this study, SmWRKY40 …

Fine Mapping of Candidate Gene Controlling Anthocyanin Biosynthesis for Purple Peel in Solanum melongena L. Open

Kai Xiao, Feng Tan, Aidong Zhang, Yaru Zhou, Weimin Zhu , et al. · 2024

Fruit color is an intuitive quality of horticultural crops that can be used as an evaluation criterion for fruit ripening and is an important factor affecting consumers’ purchase choices. In this study, a genetic population from the cross …

The impact of the COVID-19 pandemic on the trend of ventilator associated pneumonia incidence in a non-COVID-19 dedicated hospital Open

Qiao Yuan, Zhe Yuan, Weimin Zhu · 2023

Introduction: Ventilator associated pneumonia (VAP) is one of the most common hospital-acquired infections for intensive care units in China. Since the COVID-19 outbreak, “Lockdown Wuhan” and other infection control strategies had been imp…

Diurnal gene oscillations modulated by <span>RNA</span> metabolism in tomato Open

Yingying Zhang, Pengfei Xu, Wanxin Xue, Weimin Zhu, Xiang Yu · 2023

SUMMARY Diurnal rhythms are known to regulate the expression of a large number of genes, coordinating plant growth and development with diel changes in light and temperature. However, the impact of RNA metabolism on rhythmic gene oscillati…

Differences in Physiological Responses of Two Tomato Genotypes to Combined Waterlogging and Cadmium Stresses Open

Rong Zhou, Lifei Niu, Jian Yin, Fangling Jiang, Yinlei Wang , et al. · 2023

Waterlogging and heavy mental (e.g., cadmium) stress are two primary threats to crop growth. The combination of abiotic stresses was common and frequent, especially in the field condition. Even though the effects of individual waterlogging…

Identification of Genes of Molecular Marker TGS0892 on Chromosome 6 and Its Mechanism of Soluble Solids Metabolism in Tomato Open

Rongrong Zhang, Jianping Tao, Liuxia Song, Jiaqi Zhang, Hui Liu , et al. · 2023

Tomato (Solanum lycopersicum L.) is one of the vegetables widely cultivated in the world, whose fruits are rich in nutrients. Soluble solids content (SSC) is one of the important factors affecting tomato fruit flavor and plays a decisive r…

Identification of Key Regulatory Factors of Molecular Marker TGS377 on Chromosome 1 and Its Response to Cold Stress in Tomato Open

Jiaqi Zhang, Tao Jian-ping, Liuxia Song, Rongrong Zhang, Hui Liu , et al. · 2022

Low temperature, as a kind of stress factor, often leads to tomato growth stagnation or yield reduction or even no harvest in production. At present, numerous genes have been shown to be involved in the regulation of cold resistance in the…

Comprehensive Quality and Bioactive Constituent Analysis of Celery Juice Made from Different Cultivars Open

Jun Yan, Xiaofeng Yang, Lizhong He, Huang Zhiwu, Mingfen Zhu , et al. · 2022

Celery juice is rich in bioactive constituents, has good health properties, and is becoming much more popular, with its demand continuing to rise. The results of this study show that celery juice from Chinese cultivars contains more bioact…

Comparative Transcriptome Analysis Reveals Gene Expression Differences in Eggplant (Solanum melongena L.) Fruits with Different Brightness Open

Aidong Zhang, Qianru Huang, Jianyong Li, Weimin Zhu, Xiaohui Liu , et al. · 2022

Fruit brightness is an important quality trait that affects the market value of eggplant. However, few studies have been conducted on eggplant brightness. In this study, we aimed to identify genes related to this trait in three varieties o…

24-Epibrassinolide and 2,6-Dichlorobenzonitrile Promoted Celery Petioles and Hypocotyl Elongation by Altering Cellulose Accumulation and Cell Length Open

Yanhua Liu, Miao Sun, Hao Wang, Jie-Xia Liu, Guo‐Fei Tan , et al. · 2022

BRs (brassinosteroids), an endogenous hormone in plants, regulate cellulose accumulation, cell elongation and plant growth. Propiconazole (PCZ) is an effective inhibitor of BR biosynthesis. DCB (2,6-Dichlorobenzonitrile) can inhibit the sy…

Fine Mapping and Gene Analysis of restorer-of-fertility Gene CaRfHZ in Pepper (Capsicum annuum L.) Open

Zhixing Nie, Yunpeng Song, Hong Wang, Jianying Chen, Qingliang Niu , et al. · 2022

Cytoplasmic male sterility (CMS) is a common biological phenomenon used in hybrid production of peppers (Capsicum annuum L.). Although several restorer-of-fertility (Rf) genes of pepper CMS lines have been mapped, there is no report that t…

SlSPS, a Sucrose Phosphate Synthase Gene, Mediates Plant Growth and Thermotolerance in Tomato Open

Yingying Zhang, Dewen Zeng, Yahui Liu, Weimin Zhu · 2022

Heat stress (HS) has been considered as a severe threat to crop yields in recent years. Sucrose, as a major product of photosynthesis, plays an important role in plant growth and stress response. Sucrose phosphate synthase (SPS) is a key r…

Changes in Leaf and Growth of Pak Choi in a Semi-closed Greenhouse in Eastern China Open

Xiaotao Ding, Hongmei Zhang, Lizhong He, Haijun Jin, Qiang Zhou , et al. · 2022

To study and model changes in the development of pak choi ( Brassica rapa ssp. chinensis Makino), three pak choi cultivars—Xinxiaqing No. 5 (Xinxiaqing 5), Haiqing, and Huawang—were grown in a modern greenhouse. Four structural parameters,…

Metabolomic Analysis, Combined with Enzymatic and Transcriptome Assays, to Reveal the Browning Resistance Mechanism of Fresh-Cut Eggplant Open

Xiaohui Liu, Kai Xiao, Aidong Zhang, Weimin Zhu, Hui Zhang , et al. · 2022

Browning has been the primary limitation in eggplant processing. This study investigates the molecular mechanism underlying fresh-cut eggplant fruit browning by observing the physicochemical characteristics of browning-resistant (‘F’) and …

Comparative Transcriptome Analysis of the Anthers from the Cytoplasmic Male-Sterile Pepper Line HZ1A and Its Maintainer Line HZ1B Open

Zhixing Nie, Jianying Chen, Yunpeng Song, FU Hong-fei, Hong Wang , et al. · 2021

Cytoplasmic male-sterility (CMS) is important for the utilization of crop heterosis and study of the molecular mechanisms involved in CMS could improve breeding programs. In the present study, anthers of the pepper CMS line HZ1A and its ma…

Genome-Wide Identification and Characterization of Cysteine-Rich Receptor-Like Protein Kinase Genes in Tomato and Their Expression Profile in Response to Heat Stress Open

Yahui Liu, Zhengxiang Feng, Weimin Zhu, Junzhong Liu, Yingying Zhang · 2021

During plant growth, development and stress adaption, receptor-like protein kinases (RLKs) are essential components in perceiving and integrating extracellular stimuli and transmitting the signals to activate the downstream signaling pathw…

The histone variant Sl_H2A.Z regulates carotenoid biosynthesis and gene expression during tomato fruit ripening Open

Xuedong Yang, Xuelian Zhang, Youxin Yang, Hui Zhang, Weimin Zhu , et al. · 2021

The conserved histone variant H2A.Z is essential for transcriptional regulation; defense responses; and various biological processes in plants, such as growth, development, and flowering. However, little is known about how H2A.Z affects th…

Genome-Wide Identification of Circular RNAs in Response to Low-Temperature Stress in Tomato Leaves Open

Xuedong Yang, Yahui Liu, Hui Zhang, Jinyu Wang, Gaurav Zinta , et al. · 2020

Abiotic stress adversely inhibits the growth and development of plants, by changing the expression of multiple genes. Circular RNAs (circRNAs), as a class of non-coding RNAs, function in transcriptional and posttranscriptional regulation. …

Risk factors for carbapenem-resistant Klebsiella pneumoniae infection relative to two types of control patients: a systematic review and meta-analysis Open

Weimin Zhu, Zhe Yuan, Hongyu Zhou · 2020

Background Studies on risk factors for carbapenem-resistant Klebsiella pneumoniae (CRKP) infection have provided inconsistent results, partly due to the choice of the control group. We conducted a systematic review and meta-analysis to ass…

Expression Analysis, Functional Marker Development and Verification of AgFNSI in Celery Open

Jun Yan, Lizhong He, Shuang Xu, Yanhui Wan, Hong Wang , et al. · 2020

Aqueous humor metabolomic profiles in association with diabetic mellitus. Open

Yuerong Yao, Hanmin Wang, Beijing Zhu, Jun Hu, Jie Huang , et al. · 2018

Diabetic mellitus (DM), commonly referred to diabetes, is a worldwide metabolic disorder, which usually causes high morbidity and mortality rates. Especially, DM may result in serious macrovascular problems including cataract. To investiga…

Heat shock factors in tomatoes: genome-wide identification, phylogenetic analysis and expression profiling under development and heat stress Open

Xuedong Yang, Weimin Zhu, Hui Zhang, Na Liu, Shoubo Tian · 2016

The HSF (heat shock factor) gene family contains highly conserved plant-specific transcription factors that play an important role in plant high-temperature stress responses. The present study aimed to characterize the HSF transcription fa…

SpinachDB: A Well-Characterized Genomic Database for Gene Family Classification and SNP Information of Spinach Open

Xuedong Yang, Huawei Tan, Weimin Zhu · 2016

Spinach (Spinacia oleracea L.), which originated in central and western Asia, belongs to the family Amaranthaceae. Spinach is one of most important leafy vegetables with a high nutritional value as well as being a perfect research material…

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