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View article: Managing regulatory issues arising from new diagnostic technologies: High throughput sequencing as a case study
Managing regulatory issues arising from new diagnostic technologies: High throughput sequencing as a case study Open
New diagnostic technologies such as high throughput sequencing (HTS) are powerful tools that are used to detect and identify a broad range of biological organisms. As a relatively new diagnostic technology, HTS generates large volumes of d…
View article: Guidelines for the reliable use of high throughput sequencing technologies to detect plant pathogens and pests
Guidelines for the reliable use of high throughput sequencing technologies to detect plant pathogens and pests Open
High-throughput sequencing (HTS) technologies have the potential to become one of the most significant advances in molecular diagnostics. Their use by researchers to detect and characterize plant pathogens and pests has been growing steadi…
View article: High-throughput sequencing for the diagnostic of plant pathologies and identification of pests: recommendations and challenges
High-throughput sequencing for the diagnostic of plant pathologies and identification of pests: recommendations and challenges Open
International audience
View article: Facilitating the adoption of high‐throughput sequencing technologies as a plant pest diagnostic test in laboratories: A step‐by‐step description
Facilitating the adoption of high‐throughput sequencing technologies as a plant pest diagnostic test in laboratories: A step‐by‐step description Open
High‐throughput sequencing (HTS) is a powerful tool that enables the simultaneous detection and potential identification of any organisms present in a sample. The growing interest in the application of HTS technologies for routine diagnost…
View article: First record of Bursaphelenchus hildegardae Braasch et al., 2006 (Nematoda) in New Zealand with updated information on morphology, sequencing and a key to species of the eggersi-group
First record of Bursaphelenchus hildegardae Braasch et al., 2006 (Nematoda) in New Zealand with updated information on morphology, sequencing and a key to species of the eggersi-group Open
Bursaphelenchus hildegardae Braasch et al., 2006 was collected from pine wood (Pinus radiata) growing in Kaingaroa Timberlands, and a bark beetle, Hylastes ater Paykull, 1800 in New Zealand. This is a new record for B. hildegardae, occurin…
View article: First record of Bursaphelenchus hildegardae Braasch et al., 2006 (Nematoda) in New Zealand with updated information on morphology, sequencing and a key to species of the eggersi-group
First record of Bursaphelenchus hildegardae Braasch et al., 2006 (Nematoda) in New Zealand with updated information on morphology, sequencing and a key to species of the eggersi-group Open
This dataset contains the digitized treatments in Plazi based on the original journal article Zhao, Zeng Qi, Surrey, Michael, Ho, Wellcome, Marinov, Milen, Bleach, Carolyn, Rogan, Brent, Alexander, Brett (2021): First record of Bursaphelen…
View article: Australia: A Continent Without Native Powdery Mildews? The First Comprehensive Catalog Indicates Recent Introductions and Multiple Host Range Expansion Events, and Leads to the Re-discovery of Salmonomyces as a New Lineage of the Erysiphales
Australia: A Continent Without Native Powdery Mildews? The First Comprehensive Catalog Indicates Recent Introductions and Multiple Host Range Expansion Events, and Leads to the Re-discovery of Salmonomyces as a New Lineage of the Erysiphales Open
In contrast to Eurasia and North America, powdery mildews (Ascomycota, Erysiphales) are understudied in Australia. There are over 900 species known globally, with fewer than currently 60 recorded from Australia. Some of the Australian reco…
View article: Chasing myrtle rust in New Zealand: host range and distribution over the first year after invasion
Chasing myrtle rust in New Zealand: host range and distribution over the first year after invasion Open
After the detection of the myrtle rust pathogen, Austropuccinia psidii, in New Zealand, a biosecurity response was initiated, including a wide-spread surveillance programme. Through an intensive public awareness initiative, the general pub…
View article: Validation of qPCR assays for the detection of citrus canker
Validation of qPCR assays for the detection of citrus canker Open
Citrus canker, a serious bacterial disease affecting the citrus industry worldwide, is caused by Xanthomonas citri subsp. citri (Xcc) pathotypes A, A* and Aw, and to a lesser extent by X. fuscans subsp. aurantifolii (Xfa). The recent citru…
View article: An insight into biosecurity plant-disease diagnostics at MPI
An insight into biosecurity plant-disease diagnostics at MPI Open
The Mycology and Bacteriology team of the Ministry for Primary Industries’ Plant Health and Environment Laboratory is responsible for the identification and verification of all suspected exotic, new, and emerging pathogens affecting plants…
View article: Genetic validation of historical plant pathology records – a case study based on the fungal genus <i>Phoma</i> from the <scp>ICMP</scp> culture collection
Genetic validation of historical plant pathology records – a case study based on the fungal genus <i>Phoma</i> from the <span>ICMP</span> culture collection Open
Fungal taxonomy and classification, and fungal identification tools, are increasingly based on DNA sequencing technologies. In contrast, many historical records of fungi are based on morphologically identified specimens. Scientific collect…
View article: First record of the root knot nematode, Meloidogyne minor in New Zealand with description, sequencing information and key to known species of Meloidogyne in New Zealand
First record of the root knot nematode, Meloidogyne minor in New Zealand with description, sequencing information and key to known species of Meloidogyne in New Zealand Open
Meloidogyne minor Karssen et al. 2004 was collected from perennial ryegrass (Lolium perenne L.) growing in a sports ground in Christchurch, New Zealand. This is a new record for M. minor, the first report of this nematode occurring in New …
View article: First record of the root knot nematode, Meloidogyne minor in New Zealand with description, sequencing information and key to known species of Meloidogyne in New Zealand
First record of the root knot nematode, Meloidogyne minor in New Zealand with description, sequencing information and key to known species of Meloidogyne in New Zealand Open
This dataset contains the digitized treatments in Plazi based on the original journal article Zhao, Zeng Qi, Ho, Wellcome, Griffin, Ruth, Surrey, Michael, Taylor, Robert, Aalders, Lee T., Bell, Nigel L., Xu, Yu Mei, Alexander, Brett J. R. …
View article: Phytophthora agathidicida
Phytophthora agathidicida Open
Differential oogonium ornamentation, together with the size of the oospore, was first recognised to be a diagnostic characteristic by Beever et al. (2009) in their study of representative isolates of the members of Clade 5.The mean oospore…
View article: Real-Time PCR Assays for the Detection of <i>Puccinia psidii</i>
Real-Time PCR Assays for the Detection of <i>Puccinia psidii</i> Open
Puccinia psidii (Myrtle rust) is an emerging pathogen that has a wide host range in the Myrtaceae family; it continues to show an increase in geographic range and is considered to be a significant threat to Myrtaceae plants worldwide. In t…