Explanipedia

Molecular Learning and Memory of Brain Aging Open

H. Fai Poon, Jun Yuan, Wayne Wenzhong Xu, Alan F Wu · 2023

This chapter discusses the molecular basis of learning and memory, specifically the Hebbian theory, which suggests that coincident activation of pre- and postsynaptic neurons leads to modifications in synaptic efficacy, creating associativ…

Integrative analysis reveals novel associations between DNA methylation and the serum metabolome of adolescents with type 2 diabetes: A cross-sectional study Open

Prasoon Agarwal, Brandy Wicklow, Allison Dart, Nikho A. Hizon, Elizabeth Sellers , et al. · 2022

Objective Rates of type 2 diabetes (T2D) among adolescents are on the rise. Epigenetic changes could be associated with the metabolic alterations in adolescents with T2D. Methods We performed a cross sectional integrated analysis of DNA me…

Additional file 13 of Uncovering the Arabidopsis thaliana nectary transcriptome: investigation of differential gene expression in floral nectariferous tissues Open

Brian W Kram, Wayne Wenzhong Xu, Clay J. Carter · 2022

Additional file 13: Oligonucleotides used in this study. List of primers used for RT PCR validation experiments. (XLS 20 KB)

Additional file 11 of Uncovering the Arabidopsis thaliana nectary transcriptome: investigation of differential gene expression in floral nectariferous tissues Open

Brian W Kram, Wayne Wenzhong Xu, Clay J. Carter · 2022

Additional file 11: Gene ontologies for nectary enriched genes. Full gene ontology analysis for nectary-enriched genes. (XLS 46 KB)

Additional file 2 of Uncovering the Arabidopsis thaliana nectary transcriptome: investigation of differential gene expression in floral nectariferous tissues Open

Brian W Kram, Wayne Wenzhong Xu, Clay J. Carter · 2022

Additional file 2: Non-nectary reference tissues. Description of non-nectary reference tissue .cel files used for analyses. (XLS 44 KB)

Additional file 8 of Uncovering the Arabidopsis thaliana nectary transcriptome: investigation of differential gene expression in floral nectariferous tissues Open

Brian W Kram, Wayne Wenzhong Xu, Clay J. Carter · 2022

Additional file 8: Nectary versus nectary comparison. Filterable list comparing gene expression between different nectary samples. (XLS 9 MB)

Additional file 5 of Uncovering the Arabidopsis thaliana nectary transcriptome: investigation of differential gene expression in floral nectariferous tissues Open

Brian W Kram, Wayne Wenzhong Xu, Clay J. Carter · 2022

Additional file 5: MLN versus reference tissues. List comparing gene expression between MLN and reference tissues (includes p and q values). (TXT 19 MB)

Additional file 6 of Uncovering the Arabidopsis thaliana nectary transcriptome: investigation of differential gene expression in floral nectariferous tissues Open

Brian W Kram, Wayne Wenzhong Xu, Clay J. Carter · 2022

Additional file 6: MMN versus reference tissues. List comparing gene expression between MMN and reference tissues (includes p and q values). (TXT 19 MB)

Additional file 3 of Uncovering the Arabidopsis thaliana nectary transcriptome: investigation of differential gene expression in floral nectariferous tissues Open

Brian W Kram, Wayne Wenzhong Xu, Clay J. Carter · 2022

Additional file 3: All normalized probe values. Full list of normalized probe signal intensities for all genes called 'present' in nectaries (includes values for reference tissues). (XLS 20 MB)

Additional file 4 of Uncovering the Arabidopsis thaliana nectary transcriptome: investigation of differential gene expression in floral nectariferous tissues Open

Brian W Kram, Wayne Wenzhong Xu, Clay J. Carter · 2022

Additional file 4: ILN versus reference tissues. List comparing gene expression between ILN and reference tissues (includes p and q values). (TXT 19 MB)

Deep Learning Genome-wide Linkage Association Study for Wheat Fusarium Head Blight Resistance Genes Discovery Open

Wayne Wenzhong Xu, Andriy Bilichak, Raman Dhariwal, María Antonia Henríquez, Harpinder Randhawa · 2021

Background Fusarium head blight (FHB) is one of the most devastating diseases of wheat worldwide and artificial intelligence can assist with understanding resistance to the disease. Considering different sample populations, marker types, r…

Transcriptome Alterations of an in vitro-Selected, Moderately Resistant, Two-Row Malting Barley in Response to 3ADON, 15ADON, and NIV Chemotypes of Fusarium graminearum Open

James R. Tucker, W. G. Legge, Sujit Maiti, Colin W. Hiebert, Şenay Şimşek , et al. · 2021

Fusarium head blight caused by Fusarium graminearum is a devastating disease of malting barley. Mycotoxins associated with contaminated grain can be transferred from malt to beer and pose a health risk to consumers. In western Canada, F. g…

Genome Assembly of the Canadian two-row Malting Barley cultivar AAC Synergy Open

Wayne Wenzhong Xu, James R. Tucker, Wubishet A. Bekele, Frank M. You, Yong‐Bi Fu , et al. · 2021

Barley (Hordeum vulgare L.) is one of the most important global crops. The six-row barley cultivar Morex reference genome has been used by the barley research community worldwide. However, this reference genome can have limitations when us…