Yingshun Cui
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View article: Multidimensional sampling framework reveals plant-driven effects on microbial spatial heterogeneity and niche differentiation in a natural ecosystem
Multidimensional sampling framework reveals plant-driven effects on microbial spatial heterogeneity and niche differentiation in a natural ecosystem Open
Collectively, these findings demonstrate that 3D sampling approach provides a reproducible and scalable methodology for investigating microbial spatial heterogeneity, pathogen ecology, and niche differentiation in natural environments.
View article: Freshwater shrimp (Neocaridina denticulata) as a nature-based restoration tool for macrophyte recovery and improved water quality in eutrophic ponds
Freshwater shrimp (Neocaridina denticulata) as a nature-based restoration tool for macrophyte recovery and improved water quality in eutrophic ponds Open
Globally, eutrophication poses a serious threat to freshwater ecosystems, disrupting ecological balance and biodiversity. Effective restoration requires practical, sustainable, and ecosystem-based methods to reestablish healthy aquatic sys…
View article: Generalists and keystone species drive rhizosphere microbial diversity and stability in feral Brassica napus
Generalists and keystone species drive rhizosphere microbial diversity and stability in feral Brassica napus Open
View article: Microbial generalists as keystone species: constructing core network modules in the anthosphere of twelve diverse wild plant species
Microbial generalists as keystone species: constructing core network modules in the anthosphere of twelve diverse wild plant species Open
Overall, the anthosphere depends on the plant species and microbial generalists function as keystone species to support and connect the anthospheric microbiome in natural habitats.
View article: Microbiome dataset of bacterial and fungal communities in anthosphere of twelve different wild plants in South Korea
Microbiome dataset of bacterial and fungal communities in anthosphere of twelve different wild plants in South Korea Open
View article: Vegetation as a key driver of the distribution of microbial generalists that in turn shapes the overall microbial community structure in the low Arctic tundra
Vegetation as a key driver of the distribution of microbial generalists that in turn shapes the overall microbial community structure in the low Arctic tundra Open
View article: Microbiome Dataset of Bacterial and Fungal Communities in Anthosphere of Twelve Different Wild Plants in South Korea
Microbiome Dataset of Bacterial and Fungal Communities in Anthosphere of Twelve Different Wild Plants in South Korea Open
View article: Organic Connection of Holobiont Components and the Essential Roles of Core Microbes in the Holobiont Formation of Feral Brassica napus
Organic Connection of Holobiont Components and the Essential Roles of Core Microbes in the Holobiont Formation of Feral Brassica napus Open
Brassica napus (Rapeseed) is an econfomically important oil-producing crop. The microbial interactions in the plant holobiont are fundamental to the understanding of plant growth and health. To investigate the microbial dynamics in the hol…
View article: Microbial Interactions and Roles in Soil Fertility in Seasonal Freeze-Thaw Periods under Different Straw Returning Strategies
Microbial Interactions and Roles in Soil Fertility in Seasonal Freeze-Thaw Periods under Different Straw Returning Strategies Open
With the increase of world food demand, the intensity of cultivated land use also increased. To improve soil nutrient concentrations and crop yield, several straw returning techniques have been developed. Studies have shown that straw retu…
View article: Sampling Constraints and Variability in the Analysis of Bacterial Community Structures in the Sea Surface Microlayer
Sampling Constraints and Variability in the Analysis of Bacterial Community Structures in the Sea Surface Microlayer Open
The sea surface microlayer (SML) is a thin surface film located at the interface between oceans and the atmosphere. In this study, three SML samplers—polycarbonate membrane (PC), glass plate (GP), and drum sampler (DS)—were used to collect…
View article: Seasonal succession of microbes in different size-fractions and their modular structures determined by both macro- and micro-environmental filtering in dynamic coastal waters
Seasonal succession of microbes in different size-fractions and their modular structures determined by both macro- and micro-environmental filtering in dynamic coastal waters Open
Microbes interact with each other in response to various environmental changes in coastal marine ecosystems. To explore how the macroenvironment (environmental filtering) and species-engineered microenvironment (niche construction) affect …
View article: Distribution of Dimethylsulfoniopropionate Degradation Genes Reflects Strong Water Current Dependencies in the Sanriku Coastal Region in Japan: From Mesocosm to Field Study
Distribution of Dimethylsulfoniopropionate Degradation Genes Reflects Strong Water Current Dependencies in the Sanriku Coastal Region in Japan: From Mesocosm to Field Study Open
Dimethyl sulfide (DMS) is an important component of the global sulfur cycle as it is the most abundant sulfur compound that is emitted via the ocean surface to the atmosphere. Dimethylsulfoniopropionate (DMSP), the precursor of DMS,…
View article: Unique microbial module regulates the harmful algal bloom (Cochlodinium polykrikoides) and shifts the microbial community along the Southern Coast of Korea
Unique microbial module regulates the harmful algal bloom (Cochlodinium polykrikoides) and shifts the microbial community along the Southern Coast of Korea Open
View article: Characterization of Distinct CyanoHABs-Related Modules in Microbial Recurrent Association Network
Characterization of Distinct CyanoHABs-Related Modules in Microbial Recurrent Association Network Open
To elucidate the interspecies connectivity between cyanobacteria and other bacteria (non-cyanobacteria) during cyanobacterial harmful algal blooms (cyanoHABs), samples were collected from the Nakdong River, Korea, from June 2016 to August …
View article: The water depth-dependent co-occurrence patterns of marine bacteria in shallow and dynamic Southern Coast, Korea
The water depth-dependent co-occurrence patterns of marine bacteria in shallow and dynamic Southern Coast, Korea Open
View article: Genome Sequences of Two Cyanobacterial Strains, Toxic Green <i>Microcystis aeruginosa</i> KW (KCTC 18162P) and Nontoxic Brown <i>Microcystis</i> sp. Strain MC19, under Xenic Culture Conditions
Genome Sequences of Two Cyanobacterial Strains, Toxic Green <i>Microcystis aeruginosa</i> KW (KCTC 18162P) and Nontoxic Brown <i>Microcystis</i> sp. Strain MC19, under Xenic Culture Conditions Open
Bloom-forming cyanobacteria pose concerns for the environment and the health of humans and animals by producing toxins and thus lowering water quality. Here, we report near-complete genome sequences of two Microcystis strains under xenic c…
View article: Periphyton effects on bacterial assemblages and harmful cyanobacterial blooms in a eutrophic freshwater lake: a mesocosm study
Periphyton effects on bacterial assemblages and harmful cyanobacterial blooms in a eutrophic freshwater lake: a mesocosm study Open
Periphyton comprises a broad range of autotrophic and heterotrophic organisms that grow on submerged surfaces in aquatic environments. To investigate the ecological roles of periphyton and their symbiotic bacterial assemblages related to t…
View article: Abundance and Distribution of Dimethylsulfoniopropionate Degradation Genes and the Corresponding Bacterial Community Structure at Dimethyl Sulfide Hot Spots in the Tropical and Subtropical Pacific Ocean
Abundance and Distribution of Dimethylsulfoniopropionate Degradation Genes and the Corresponding Bacterial Community Structure at Dimethyl Sulfide Hot Spots in the Tropical and Subtropical Pacific Ocean Open
Dimethylsulfoniopropionate (DMSP) is mainly produced by marine phytoplankton but is released into the microbial food web and degraded by marine bacteria to dimethyl sulfide (DMS) and other products. To reveal the abundance and distribution…