Yousef Nami
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View article: Hydrolyzed Trichoderma ghanense and Simplicillium obclavatum elicitors improve ionic homeostasis and callus growth under salinity stress in date palm
Hydrolyzed Trichoderma ghanense and Simplicillium obclavatum elicitors improve ionic homeostasis and callus growth under salinity stress in date palm Open
View article: Machine learning based association analysis of plantaricin gene occurrence and diversity with antimicrobial potential in Lactiplantibacillus plantarum strains isolated from Iranian traditional dairy products
Machine learning based association analysis of plantaricin gene occurrence and diversity with antimicrobial potential in Lactiplantibacillus plantarum strains isolated from Iranian traditional dairy products Open
In this study, we examined 43 Lactiplantibacillus plantarum isolates from Iranian traditional dairy products to elucidate the correlation between plantaricin gene profiles and antimicrobial activity. Twelve target pln genes were screened u…
View article: Survivability, antimicrobial and anticancer effects, and cytotoxicity of Lactobacillus strains isolated from traditional Iranian cheese
Survivability, antimicrobial and anticancer effects, and cytotoxicity of Lactobacillus strains isolated from traditional Iranian cheese Open
This study aimed to explore the beneficial properties, antimicrobial, and potential anticancer effects of Lactobacillus bacteria isolated from traditional dairy products on oral cancer cell lines. Twenty-one Lactobacillus strains were obta…
View article: Synergistic antimicrobial and probiotic activity of lactic acid bacteria isolated from Tarkhineh against Candida albicans
Synergistic antimicrobial and probiotic activity of lactic acid bacteria isolated from Tarkhineh against Candida albicans Open
View article: Harnessing Lactobacillus-derived SCFAs for food and health: Pathways, genes, and functional implications
Harnessing Lactobacillus-derived SCFAs for food and health: Pathways, genes, and functional implications Open
Short-chain fatty acids (SCFAs) are crucial microbial metabolites that mediate host-microbiota interactions, regulate immune responses, and maintain gut homeostasis. While most studies focus on SCFA production by obligate anaerobes, recent…
View article: Mechanism of Action and Beneficial Effects of Probiotics in Amateur and Professional Athletes
Mechanism of Action and Beneficial Effects of Probiotics in Amateur and Professional Athletes Open
Probiotics are live microorganisms that, when administered in adequate amounts, provide health benefits to the host. According to the International Society of Sports Nutrition (ISSN), probiotic supplementation can optimize the health, perf…
View article: Genome mining approach reveals the CRISPR-Cas systems features and characteristics in Lactobacillus delbrueckii strains
Genome mining approach reveals the CRISPR-Cas systems features and characteristics in Lactobacillus delbrueckii strains Open
This study employed a comprehensive genome-mining approach to characterize CRISPR-Cas systems in Lactobacillus delbrueckii strains. The analysis involved retrieving 105 genome sequences to explore the variety, occurrence, and evolut…
View article: Evaluation of herbicidal potential of Siderophores produced by Amycolatopsis lurida strain 407
Evaluation of herbicidal potential of Siderophores produced by Amycolatopsis lurida strain 407 Open
The urgent need for sustainable agriculture has intensified the search for environmentally friendly alternatives to chemical herbicides. This study investigates the herbicidal potential of siderophores produced by Amycolatopsis lurida stra…
View article: Metabolite profiling of different Iranian traditional yogurts using an untargeted metabolomics approach
Metabolite profiling of different Iranian traditional yogurts using an untargeted metabolomics approach Open
View article: Ecological and evolutionary dynamics of CRISPR-Cas systems in Clostridium botulinum: Insights from genome mining and comparative analysis
Ecological and evolutionary dynamics of CRISPR-Cas systems in Clostridium botulinum: Insights from genome mining and comparative analysis Open
Understanding the prevalence and distribution of CRISPR-Cas systems across different strains can illuminate the ecological and evolutionary dynamics of Clostridium botulinum populations. In this study, we conducted genome mining to charact…
View article: Bifidobacterium exopolysaccharides: new insights into engineering strategies, physicochemical functions, and immunomodulatory effects on host health
Bifidobacterium exopolysaccharides: new insights into engineering strategies, physicochemical functions, and immunomodulatory effects on host health Open
Bifidobacteria are a prominent type of bacteria that have garnered significant research attention for their exceptional probiotic properties and capacity to produce exopolysaccharides (EPSs). These compounds exhibit diverse physical, chemi…
View article: Potential probiotic Lactobacillus delbrueckii subsp. lactis KUMS-Y33 suppresses adipogenesis and promotes osteogenesis in human adipose-derived mesenchymal stem cell
Potential probiotic Lactobacillus delbrueckii subsp. lactis KUMS-Y33 suppresses adipogenesis and promotes osteogenesis in human adipose-derived mesenchymal stem cell Open
View article: Anti-oral cancer properties of potential probiotic lactobacilli isolated from traditional milk, cheese, and yogurt
Anti-oral cancer properties of potential probiotic lactobacilli isolated from traditional milk, cheese, and yogurt Open
This study investigates the probiotic and anti-cancer effects of 21 isolated Lactobacillus strains from cheese, milk, and yogurt in Kermanshah, Iran, on oral cancer cell lines KB and OSCC. Four selected isolates (Y33, M45, C5, and C28) dis…
View article: Integration of machine learning models with microsatellite markers: New avenue in world grapevine germplasm characterization
Integration of machine learning models with microsatellite markers: New avenue in world grapevine germplasm characterization Open
View article: Isolation and assessment of novel exopolysaccharide-producing Weissella confusa ABRIIFBI-96 isolated from an Iranian homemade dairy fermented food “Tof” as a main starter culture for probiotic fermented milk
Isolation and assessment of novel exopolysaccharide-producing Weissella confusa ABRIIFBI-96 isolated from an Iranian homemade dairy fermented food “Tof” as a main starter culture for probiotic fermented milk Open
This study focused on evaluating lactic acid bacteria (LAB) isolates for their probiotic characteristics and safety, as well as potential as a primary starter culture in probiotic fermented milk production. Ten LAB isolates underwent in vi…
View article: CRISPR-Cas systems feature and targeting phages diversity in Lacticaseibacillus rhamnosus strains
CRISPR-Cas systems feature and targeting phages diversity in Lacticaseibacillus rhamnosus strains Open
One of the most important adaptive immune systems in bacteria against phages is clustered regularly interspaced short palindromic repeats (CRISPR) and CRISPR-associated (CAS) genes. In this investigation, an approach based on genome mining…
View article: CRISPR-Cas systems and diversity of targeting phages in Lactobacillus johnsonii strains; insights from genome mining approach
CRISPR-Cas systems and diversity of targeting phages in Lactobacillus johnsonii strains; insights from genome mining approach Open
Clustered regularly interspaced short palindromic repeats (CRISPR) and CRISPR-associated (CAS) genes make up bacteria's adaptive immune system. These genes protect bacteria from being eaten by bacteriophages. In this study, CRISPR-Cas syst…
View article: Cytotoxic effect of potential probiotic Lactiplantibacillus plantarum KUMS-Y8 isolated from traditional dairy samples on the KB and OSCC human cancer cell lines
Cytotoxic effect of potential probiotic Lactiplantibacillus plantarum KUMS-Y8 isolated from traditional dairy samples on the KB and OSCC human cancer cell lines Open
Oral cancer is one of the leading causes of death worldwide, and its prevalence is especially high in developing countries. As an oral cancer treatment, traditional therapies are commonly used. Nonetheless, these treatments frequently resu…
View article: Probiotic properties and antimicrobial evaluation of silymarin-enriched Lactobacillus bacteria isolated from traditional curd
Probiotic properties and antimicrobial evaluation of silymarin-enriched Lactobacillus bacteria isolated from traditional curd Open
Nowadays, the increasing use of medicinal plants in the treatment and prevention of diseases has attracted the attention of researchers. The aim of this work was to investigate the probiotic properties and antibacterial and antifungal acti…
View article: Potential probiotic characterization of lactic acid bacteria isolated from Duimaj, an Iranian traditional snack food, using biochemical, molecular and computational approaches
Potential probiotic characterization of lactic acid bacteria isolated from Duimaj, an Iranian traditional snack food, using biochemical, molecular and computational approaches Open
The aim of this study was isolation and identification of lactic acid bacteria from Duimaj (an Iranian traditional snack food) and in vitro characterization of probiotic features. In total, thirty presumptive LAB colonies were surveyed, of…
View article: Apoptosis induction in cancer cell lines and anti-inflammatory and anti-pathogenic properties of proteinaceous metabolites secreted from potential probiotic Enterococcus faecalis KUMS-T48
Apoptosis induction in cancer cell lines and anti-inflammatory and anti-pathogenic properties of proteinaceous metabolites secreted from potential probiotic Enterococcus faecalis KUMS-T48 Open
Potential probiotic Enterococcus faecalis KUMS-T48, isolated from a kind of Iranian traditional dairy product (Tarkhineh), was assessed for its anti-pathogenic, anti-inflammatory and anti-proliferative properties against HT-29 and AGS canc…
View article: In-vitro and in-vivo antibacterial activity of potential probiotic Lactobacillus paracasei against Staphylococcus aureus and Escherichia coli
In-vitro and in-vivo antibacterial activity of potential probiotic Lactobacillus paracasei against Staphylococcus aureus and Escherichia coli Open
Previous studies documented that Lactobacillus paracasei has obvious in vitro cholesterol-lowering abilities. In this study, initially, L. paracasei was tested in terms of antibacterial properties as well as antibiogram profile. Then, the …
View article: Antifungal activity of potential probiotic Limosilactobacillus fermentum strains and their role against toxigenic aflatoxin-producing aspergilli
Antifungal activity of potential probiotic Limosilactobacillus fermentum strains and their role against toxigenic aflatoxin-producing aspergilli Open
Two major aflatoxin-producing strains are Aspergillus flavus and Aspergillus niger . Probiotic bacteria have been identified as a potential means to fight aspergilli and reduce the availability of aflatoxin (AFs) as well as other food cont…
View article: Administration of microencapsulated Enterococcus faecium ABRIINW.N7 with fructo-oligosaccharides and fenugreek on the mortality of tilapia challenged with Streptococcus agalactiae
Administration of microencapsulated Enterococcus faecium ABRIINW.N7 with fructo-oligosaccharides and fenugreek on the mortality of tilapia challenged with Streptococcus agalactiae Open
We investigated the probiotic potential of a microencapsulated Enterococcus faecium ABRIINW.N7 for control of Streptococcus agalactiae infection in hybrid ( Oreochromis niloticus × Oreochromis mossambicus ) red tilapia. A two-phase experim…
View article: Probiotic potential characterization and clustering using unsupervised algorithms of lactic acid bacteria from saltwater fish samples
Probiotic potential characterization and clustering using unsupervised algorithms of lactic acid bacteria from saltwater fish samples Open
View article: Screening of potential probiotic lactic acid bacteria with antimicrobial properties and selection of superior bacteria for application as biocontrol using machine learning models
Screening of potential probiotic lactic acid bacteria with antimicrobial properties and selection of superior bacteria for application as biocontrol using machine learning models Open
144 lactic acid bacteria (LAB) strains were screened to find those with the best antimicrobial activity and potential probiotic properties. Firstly, bacteria were tested for resistance to low pH and high bile salt, antimicrobial properties…
View article: Lactic Acid Bacteria From Saltwater Fish Samples: Probiotic Potential Characterization and Clustering Using Unsupervised Algorithms
Lactic Acid Bacteria From Saltwater Fish Samples: Probiotic Potential Characterization and Clustering Using Unsupervised Algorithms Open
This research aimed to isolate lactic acid bacteria (LAB) from the bowl of saltwater fish to assess their probiotic properties. Nineteen isolates of LAB including Lactobacillus plantarum , Lactobacillus acidophilus , Lactobacillus fermentu…
View article: Antimicrobial effects of lactic acid bacteria with probiotic ability isolated from traditional yogurts on foodborne pathogenic microorganisms
Antimicrobial effects of lactic acid bacteria with probiotic ability isolated from traditional yogurts on foodborne pathogenic microorganisms Open
The growth of contaminating microorganisms in food products causes serious diseases in humans, and the use of lactic acid bacteria to control these contaminants is a promising and developing method. In this study, lactic acid bacteria were…
View article: Sourdoughs fermented by autochthonous <i>Lactobacillus</i> strains improve the quality of gluten‐free bread
Sourdoughs fermented by autochthonous <i>Lactobacillus</i> strains improve the quality of gluten‐free bread Open
Sourdoughs based on fermentation by lactobacilli have the potential to produce gluten‐free maize‐based bread with acceptable technological and rheological characteristics, nutritional quality, and more prolonged shelf life. Of the 17 treat…
View article: Administration of Microencapsulated Enterococcus Faecium ABRIINW.N7 With Fructo- Oligosaccharides and Fenugreeko the Mortality of Tilapia Challenged with Streptococcus Agalactiae
Administration of Microencapsulated Enterococcus Faecium ABRIINW.N7 With Fructo- Oligosaccharides and Fenugreeko the Mortality of Tilapia Challenged with Streptococcus Agalactiae Open
The aim of study was to examine the probiotic potential of a microencapsulated E. faecium ABRIINW.N7 in the control of Streptococcus agalactiae infection in hybrid ( Oreochromis niloticus × Oreochromis mossambicus ) red tilapia. A two-phas…