Explanipedia

Spatiotemporal dynamics reveal high turnover and contrasting assembly processes in fungal communities across contiguous habitats of tropical forests Open

Chieh-Ping Lin, Yufei Lin, Yu‐Ching Liu, Mei‐Yeh Jade Lu, Huei‐Mien Ke , et al. · 2025

An acidophilic fungus promotes prey digestion in a carnivorous plant Open

Pei-Feng Sun, Min Lu, Yu‐Ching Liu, Brandon J. P. Shaw, Chieh-Ping Lin , et al. · 2024

Design and feasibility analysis of a graded harvesting end-effector with the function of soluble solid content estimation Open

Yufei Lin, H. Liang, Junhua Tong, Haidong Shen, Xiaping Fu , et al. · 2024

Extensive sampling of Saccharomyces cerevisiae in Taiwan reveals ecology and evolution of predomesticated lineages Open

Tracy J. Lee, Yu‐Ching Liu, Weian Liu, Yufei Lin, Hsin‐Han Lee , et al. · 2022

The ecology and genetic diversity of the model yeast Saccharomyces cerevisiae before human domestication remain poorly understood. Taiwan is regarded as part of this yeast's geographic birthplace, where the most divergent natural lineage w…

Wild Birds-The Sentinel of Antibiotic Resistance for Urban River: Study on Egrets and Jinjiang River in Chengdu, China Open

Yufei Lin, Lihua Zhang, Jinyong Wu, Kun Yang · 2022

Genomes of keystone Mortierella species lead to better in silico prediction of soil mycobiome functions from Taiwan’s offshore islands Open

Yufei Lin, Weian Liu, Yu‐Ching Liu, Hsin‐Han Lee, Yen-Ju Lin , et al. · 2021

The ability to correlate the functional relationship between microbial communities and their environment is critical to understanding microbial ecology. There is emerging knowledge on island biogeography of microbes but how island characte…

Deep sampling of ancestral genetic diversity reveals Saccharomyces cerevisiae pre-domestication life histories Open

Tracy J. Lee, Yu‐Ching Liu, Weian Liu, Yufei Lin, Hsin‐Han Lee , et al. · 2021

The ecology and genetic diversity of model yeast Saccharomyces cerevisiae prior to human domestication remain poorly understood. Taiwan is regarded as part of this yeast’s geographic birthplace where the most divergent natural lineage was …

Reversing Antibiotic Resistance Caused by Mobile Resistance Genes of High Fitness Cost Open

Jinyong Wu, Xiaohong Dong, Lihua Zhang, Yufei Lin, Kun Yang · 2021

The dissemination of bacterial antibiotic resistance is a serious threat to human health. The development of new antibiotics faces both economic and technological challenges.

Technical framework for wastewater-based epidemiology of SARS-CoV-2 Open

Jinyong Wu, Zizheng Wang, Yufei Lin, Lihua Zhang, Jing Chen , et al. · 2021

The rectal mucosal but not fecal microbiota detects subclinical ulcerative colitis Open

Yufei Lin, Chang Mu Sung, Huei‐Mien Ke, Chia‐Jung Kuo, Weian Liu , et al. · 2021

Ulcerative colitis (UC), a subtype of inflammatory bowel disease, is characterized by repetitive remission and relapse. Gut microbiome is critically involved in pathogenesis of UC. The shifts in microbiome profile during disease remission …

Technical framework for wastewater-based epidemiology of SARS-CoV-2 based on relative quantification via qPCR Open

Jinyong Wu, Zizheng Wang, Yufei Lin, Lihua Zhang, Jing Chen , et al. · 2020

The global pandemic of coronavirus disease 2019 (COVID-19) caused by severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2) has greatly affected people’s normal production, living, social and economic activities. Wastewater-based epi…

Migratory birds-one major source of environmental antibiotic resistance around Qinghai Lake, China Open

Yufei Lin, Xiaohong Dong, Rui Sun, Jiao Wu, Lejin Tian , et al. · 2020

Metadata Analysis of mcr-1-Bearing Plasmids Inspired by the Sequencing Evidence for Horizontal Transfer of Antibiotic Resistance Genes Between Polluted River and Wild Birds Open

Yufei Lin, Xiaohong Dong, Jiao Wu, Dawei Rao, Lihua Zhang , et al. · 2020

We sequenced the whole genomes of three mcr-1-positive multidrug-resistant E. coli strains, which were previously isolated from the environment of egret habitat (polluted river) and egret feces. The results exhibit high corre…

Nest microbiota and pathogen abundance impact hatching success in sea turtle conservation Open

Daphne Z. Hoh, Yufei Lin, Weian Liu, Siti Nordahliawate Mohamed Sidique, Isheng Jason Tsai · 2019

Hatchery practices are pivotal to conservation success. In sea turtle hatchery, reusing the same sand has been a norm but remains unclear whether such approach increases the risk of Fusarium solani species complex (FSSC) infection causing …

Structure and Diversity of Soil Bacterial Communities in Offshore Islands Open

Yu-Te Lin, Yufei Lin, Isheng Jason Tsai, Ed‐Haun Chang, Shih‐Hao Jien , et al. · 2019

The effects of biogeographical separation and parent material differences in soil bacterial structure and diversity in offshore islands remain poorly understood. In the current study, we used next-generation sequencing to characterize the …

Predicting Clinical Outcomes of Cirrhosis Patients With Hepatic Encephalopathy From the Fecal Microbiome Open

Chang Mu Sung, Yufei Lin, Kuan‐Fu Chen, Huei‐Mien Ke, Haoyi Huang , et al. · 2019

Integrated toxicity evaluation of metals in sediments of Jiaozhou Bay (China): Based on biomarkers responses in clam Ruditapes philippinarum exposed to sediment extracts Open

Yufei Lin, Qunqun Liu, Fanping Meng, Yichen Lin, Yongxiang Du · 2018

An Improved Binary Vector and Escherichia coli Strain for Agrobacterium tumefaciens-Mediated Plant Transformation Open

Michael R. Watson, Yufei Lin, Elizabeth Hollwey, Rachel Dodds, Peter Meyer , et al. · 2016

The plasmid vector pGreenII is widely used to produce plant transformants via a process that involves propagation in Escherichia coli. However, we show here that pGreenII-based constructs can be unstable in E. coli as a consequence of them…

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