Oryza sativa
View article: In-silico Characterization of Defence-Related Genes for Blast Resistance on Chromosome 7 in Rice (Oryza sativa L.)
In-silico Characterization of Defence-Related Genes for Blast Resistance on Chromosome 7 in Rice (Oryza sativa L.) Open
Rice blast, caused by Magnaporthe oryzae, remains a major constraint to global rice production. Genetic resistance to blast is a well known phenomenon where hundreds of QTLs or genes have been reported. The in-silico characterization of th…
View article: Genetic Diversity of Rice Bacterial Leaf Blight Pathogen, Xanthomonas oryzae pv. oryzae in Godavari Zone of Andhra Pradesh, India
Genetic Diversity of Rice Bacterial Leaf Blight Pathogen, Xanthomonas oryzae pv. oryzae in Godavari Zone of Andhra Pradesh, India Open
Bacterial leaf blight (BLB), caused by Xanthomonas oryzae pv. oryzae (Xoo), is one of the major biotic constraints limiting yields in paddy in Andhra Pradesh. The present study was conducted at ANGRAU – Regional Agricultural Research Stati…
View article: DNA methylation patterns associated with aluminum tolerance in cultivated and wild rice species
DNA methylation patterns associated with aluminum tolerance in cultivated and wild rice species Open
View article: Rice OsABCB4 delays heading date and impacts multiple agronomic traits by affecting auxin homeostasis
Rice OsABCB4 delays heading date and impacts multiple agronomic traits by affecting auxin homeostasis Open
Members of the ABCB transporter subfamily are essential for various aspects of plant growth and development; however, a large number of ABCB proteins are functionally uncharacterized. Here, we report the functional characterization of a ri…
View article: Somatic Embryogenesis: A Biotechnological Route in the Production of Recombinant Proteins
Somatic Embryogenesis: A Biotechnological Route in the Production of Recombinant Proteins Open
Somatic embryogenesis (SE) is a morphogenetic pathway widely employed in the commercial micropropagation of plants. This route enables the generation of somatic embryos from somatic tissues, which give rise to complete (bipolar) plants tha…
View article: A comprehensive view of aluminum stress in Oryza sativa from a systems biology perspective
A comprehensive view of aluminum stress in Oryza sativa from a systems biology perspective Open
View article: Balancing rice blast resistance and growth through suppression of the E3 ubiquitin ligase OsRING80
Balancing rice blast resistance and growth through suppression of the E3 ubiquitin ligase OsRING80 Open
In crop plants, there is often a trade-off between growth and defense; modulating the balance is crucial for effective crop improvement. In rice (Oryza sativa), the DENSE AND ERECT PANICLE 2 (DEP2) mutant shows altered phenotypes such as a…
View article: Genome-Wide Identification and Functional Divergence of the Chloride Channel (CLC) Gene Family in Autotetraploid Alfalfa (Medicago sativa L.)
Genome-Wide Identification and Functional Divergence of the Chloride Channel (CLC) Gene Family in Autotetraploid Alfalfa (Medicago sativa L.) Open
Chloride channel proteins (CLCs) are essential anion transporters involved in plant growth, osmotic regulation, and ion homeostasis. However, their genome-wide characterization in tetraploid alfalfa (Medicago sativa L.) remains unexplored.…
View article: OsNAC74 modulates rice growth and salt tolerance via hormone signaling pathways
OsNAC74 modulates rice growth and salt tolerance via hormone signaling pathways Open
View article: A Comprehensive Profiling of the Rice LATERAL ORGAN BOUNDARIES DOMAIN (LBD) Gene Family: Structure, Evolution, and Expressional Dynamics
A Comprehensive Profiling of the Rice LATERAL ORGAN BOUNDARIES DOMAIN (LBD) Gene Family: Structure, Evolution, and Expressional Dynamics Open
The LATERAL ORGAN BOUNDARIES DOMAIN (LBD) gene family encodes plant-specific transcription factors that play vital roles in plant growth, development, and stress responses. Rice (Oryza sativa L.), a staple food for more than half of the wo…
View article: Influence of nitrogen levels, organic amendments and foliar nutrition on growth and yield performance of rice (Oryza sativa L.) in the Cauvery Deltaic Zone
Influence of nitrogen levels, organic amendments and foliar nutrition on growth and yield performance of rice (Oryza sativa L.) in the Cauvery Deltaic Zone Open
Nitrogen (N) is an essential macronutrient vital for crop growth and development and its replenishment in agricultural soil is indispensable for sustainable food production and preventing nutrient depletion. Despite extensive research, the…
View article: A microbiome–epigenome axis: SRB‐derived H <sub>2</sub> S suppresses OsHDA710 to activate drought responses in rice
A microbiome–epigenome axis: SRB‐derived H <sub>2</sub> S suppresses OsHDA710 to activate drought responses in rice Open
This commentary highlights the recent identification of exogenous application of sodium butyrate, as a histone deacetylase inhibitor that improves rice drought resistance via enriching sulfate-reducing bacteria to elevate rhizosphere-deriv…
View article: Draft genome sequence of <i> <b>Nocardioides</b> </i> strain MAHUQ-72 isolated from soil sample of a rice field located in Anseong, South Korea
Draft genome sequence of <i> <b>Nocardioides</b> </i> strain MAHUQ-72 isolated from soil sample of a rice field located in Anseong, South Korea Open
This study reports the draft genome sequence of Nocardioides strain MAHUQ-72, a bacterial strain isolated from the soil sample of a rice field located in Anseong, South Korea, in 2020. The genome consists of 4,732,459 base pairs assembled …
View article: Genome-wide analysis of Udai21: Unraveling the genetic basis of superior eating quality in rice
Genome-wide analysis of Udai21: Unraveling the genetic basis of superior eating quality in rice Open
Rice ( Oryza sativa L.) is a staple for more than half of the world’s population, and grain quality strongly influences consumer preference and market value. Udai21, also referred to as Ohkome21, and previously designated as Yudai21, is a …
View article: Identification of microbiome-associated loci in super hybrid rice reveals the regulation of OsBRI1 on nitrogen-dependent root microbiome assembly
Identification of microbiome-associated loci in super hybrid rice reveals the regulation of OsBRI1 on nitrogen-dependent root microbiome assembly Open
Using QTL analysis, our study identifies a set of genetic loci that link the root microbiome composition of the hybrid rice LYP9 and reveals that OsBRI1 regulates the assembly of the nitrogen-dependent rice root microbiome.
View article: Multifaceted Plant Growth Promoting Yeasts Isolated from Rice and its Functional Characterization
Multifaceted Plant Growth Promoting Yeasts Isolated from Rice and its Functional Characterization Open
Background: Rice is a staple food crop worldwide and enhancing its resilience to abiotic stress such as drought is crucial for sustainable agriculture. Methods: In this study, yeast strains associated with rice plants were isolated and cha…
View article: Investigating water translocation in cryoprotectant treated oryza sativa cells
Investigating water translocation in cryoprotectant treated oryza sativa cells Open
View article: Comparative analysis of NAC genes and their expression patterns under various treatments in Dendrobium huoshanense
Comparative analysis of NAC genes and their expression patterns under various treatments in Dendrobium huoshanense Open
Extreme environmental conditions have significantly affected the natural habitats of Dendrobium huoshanense, a valuable medicinal orchid highly sensitive to abiotic stress. NAC transcription factors are key plants regulators, contributing …
View article: Genetic Regulation and Breeding Application of Medium-Chain Fatty Acids Metabolism in Rice
Genetic Regulation and Breeding Application of Medium-Chain Fatty Acids Metabolism in Rice Open
Medium-chain fatty acids (MCFAs), with carbon chain length of 6 to 12 carbon atoms, have received substantial attention in metabolism and applications in health, agriculture and industry. They have shown promising therapeutic effects for m…
View article: Impact of salinity stress on rice regeneration and molecular defense: insights from IR64 and Cigeulis varieties
Impact of salinity stress on rice regeneration and molecular defense: insights from IR64 and Cigeulis varieties Open
View article: A Novel Laboratory Protocol for Pollen Viability Assessment to Inform Biosafety Evaluation of Transgenic Rice (Oryza sativa L.)
A Novel Laboratory Protocol for Pollen Viability Assessment to Inform Biosafety Evaluation of Transgenic Rice (Oryza sativa L.) Open
Rice (Oryza sativa L.) is a vital staple crop, and the environmental risk assessment of transgenic varieties is crucial for formulating biosafety policies. Rice pollen grains are spherical, with an average diameter of 40.03 ± 2.75 μm. This…
View article: Mitigation of Terminal Heat Stress in Aerobic Rice (Oryza sativa L.) by Nitrogen and Potassium Application
Mitigation of Terminal Heat Stress in Aerobic Rice (Oryza sativa L.) by Nitrogen and Potassium Application Open
Background: Heat stress is one of the major environmental stresses limiting rice productivity. Selecting heat-tolerant rice cultivars and implementing proper nutrient management techniques could result in a high and consistent yield. Metho…
View article: Exploring intraspecific variation in salinity tolerance at germination and seedling development stages in Camelina sativa
Exploring intraspecific variation in salinity tolerance at germination and seedling development stages in Camelina sativa Open
Introduction Camelina sativa is a promising oilseed crop for cultivation on saline marginal lands due to its abiotic stress tolerance and low input requirements. However, intraspecific variation in salinity tolerance remains poorly underst…
View article: Insecticidal Efficacy of Catharanthus roseus Leaf Extract Against Sitophilus oryzae in Stored Rice Grain
Insecticidal Efficacy of Catharanthus roseus Leaf Extract Against Sitophilus oryzae in Stored Rice Grain Open
The present study evaluated the insecticidal efficacy of Catharanthus roseus leaf powder extract against Sitophilus oryzae and its effect on reducing rice grain weight loss. Mortality and grain damage were assessed at different extract con…
View article: Identification of qAs1—A Minor-Effect QTL Controlling Grain Arsenic Accumulation in Rice Using Near-Isogenic Lines Under High-Arsenic and Flooded Conditions
Identification of qAs1—A Minor-Effect QTL Controlling Grain Arsenic Accumulation in Rice Using Near-Isogenic Lines Under High-Arsenic and Flooded Conditions Open
Arsenic (As) contamination in rice poses a serious risk to food safety and human health. Genetic dissection of As-related quantitative trait loci (QTLs) provides a sustainable strategy for breeding low-As cultivars. In this study, we aimed…
View article: Influence of Maturity Stage, Seed Treatment, and Storage Containers on the Storability of Combine-Harvested Rice (Oryza sativa L. cv. CO (R) 50)
Influence of Maturity Stage, Seed Treatment, and Storage Containers on the Storability of Combine-Harvested Rice (Oryza sativa L. cv. CO (R) 50) Open
The current research aimed to investigate the impact of different maturity stages on the moisture content and storability of the combine-harvested rice variety CO (R) 50. Seeds were harvested at various stages of maturity - physiological m…
View article: Drivers of weed species composition in Hungarian organic rice paddies
Drivers of weed species composition in Hungarian organic rice paddies Open
Which factors are the most important determinants of weed species composition in organic rice fields? Which species can be associated with the extreme values of the most important background variables? To answer these questions, we surveye…
View article: Normalized Difference Vegetation Index for Rice Mapping and Estimation of Rice Area and Yield in Sudan Ecology of Nigeria
Normalized Difference Vegetation Index for Rice Mapping and Estimation of Rice Area and Yield in Sudan Ecology of Nigeria Open
Rice is a vital crop for global food security, and remote monitoring and mapping are crucial for detecting crop stress and estimating cultivated areas and outputs. This study employed Normalized Difference Vegetation Index (NDVI) and super…
View article: A CRISPR-Cas9 library to target putative redundant gene sets facilitates their functional exploration in grain development in rice
A CRISPR-Cas9 library to target putative redundant gene sets facilitates their functional exploration in grain development in rice Open
View article: Unveiling Differential Epigenetic Regulation of ABC Transporter Genes in Wild and Domestic Rice in Response to Heavy Metal Stress
Unveiling Differential Epigenetic Regulation of ABC Transporter Genes in Wild and Domestic Rice in Response to Heavy Metal Stress Open
Plants are continually subjected to heavy metal (HM) stress, which impairs critical physiological and metabolic processes. ATP-binding cassette (ABC) transporters play an important role in heavy metal detoxification, their epigenetic regul…